Paraconexibacter sp. AEG42_29: DSM112329_02141
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Entry
DSM112329_02141 CDS
T10662
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM112329_02141 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parq03021
]
DSM112329_02141 (rho)
03019 Messenger RNA biogenesis [BR:
parq03019
]
DSM112329_02141 (rho)
Transcription machinery [BR:
parq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DSM112329_02141 (rho)
Messenger RNA biogenesis [BR:
parq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSM112329_02141 (rho)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
Rho_N
ATP-synt_ab
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
XAY05292
UniProt:
A0AAU7AUK7
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All DBs
Position
2211122..2212546
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AA seq
474 aa
AA seq
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MSVFTRAALEGSPLADLHTIAGEIGLDGFRRLRKAELVDKILDATGGDSTPADEPAADAE
AAPAPRRRTRASRSSRSAARDTDPGDEDAAPAPAAADADSDEDAEPKPARRSRGGRGRSR
AADKDDTDAPAPAPTAIKADEDDAAQAEERPARRGRGGRGRIDADSDSGEQTEDKVATGV
VEVLSNGSGFLRVSPPDPSDEDIYISAAQVRRCELVSGDRITGPVRPPRRSERYPSLIRI
DQINDRPADEVAEGTPFDELPAVFPTERFALDSEDPTIKAIAVLTPIGRGSRVTITGPAR
AGKTEALQRLADAFVKQDGIELTLVLVGVRPEETTVAPEGLVPVAGLSFAASADAQGQAV
DRAVDGARRVAARGGHAVVLIDTLDGLHPAAARKALAAARALKDSGSVTVIATASAPLGG
ETTVIVLDETLTSVGRLPALDLVASGTIKPELLLGEDDAKSVAAARAQALDGTS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttcacccgcgccgccctcgagggcagcccgctcgccgacctgcacaccatc
gccggcgagatcggcctcgacggcttccgccgcctgcgcaaggccgagctcgtcgacaag
atcctcgacgccaccggcggcgacagcacacccgcggacgagccggcggccgacgccgaa
gcggcgcccgcgccccgccgccgtacgcgcgccagccgctcgtcccgcagcgccgcccgc
gacaccgatccgggcgacgaggacgccgccccggcgcccgcagctgccgacgccgactcc
gacgaggacgccgagccgaagcccgcccgtcgctcccgcggtggccgtggccgtagccgc
gccgccgacaaggacgacaccgatgcgcccgcgcccgccccgacggcgatcaaggccgac
gaggacgacgccgcgcaggccgaggagcgccctgcccgccgcggccgtgggggtcgcggc
cggatcgacgccgacagcgacagcggcgagcagaccgaggacaaggtcgcaacgggcgtc
gtcgaggtcctgagcaacggctcgggcttcctgcgcgtcagcccgcccgacccgtccgac
gaggacatctacatctccgccgcgcaggtgcgccgctgcgagctcgtctccggcgaccgc
atcaccggcccggtccgcccgccccggcgctccgagcgctacccgtccctgatccggatc
gaccagatcaacgaccgcccggccgacgaggtggccgagggcacgccgttcgacgagctg
cccgccgtcttcccgaccgagcgtttcgcgctcgacagcgaggacccgaccatcaaggcg
atcgcggtgctgaccccgatcggccgcggctcgcgcgtcaccatcaccggccccgcacgc
gccggcaagaccgaggcgctgcagcggctcgccgacgccttcgtcaagcaggacggcatc
gagctcacgctcgtcctcgtcggggtccgcccggaggagaccacggtcgcccccgagggc
ctcgtccccgtcgccggcctgagcttcgcggccagcgccgacgcgcagggccaggccgtg
gaccgcgccgtcgacggcgctcgccgcgtcgcggcccgcggtggtcacgccgtggtcctc
atcgacacgctcgacgggctgcaccccgcggccgcacgcaaggccctggcggccgcgcgg
gcgctcaaggacagcggcagcgtcacggtcatcgcgacggcgagcgccccgctcggtggc
gagacgaccgtcatcgtcctcgacgagacgctgacgtcggtcggccgcctcccggcgctg
gacctggtcgccagcggcacgatcaagcccgagctgctgctcggcgaggacgacgcgaag
tccgtcgccgccgcccgcgcccaggcgctcgacggcacctcctga
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