Paraconexibacter sp. AEG42_29: DSM112329_02960
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Entry
DSM112329_02960 CDS
T10662
Symbol
mrdA_2
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq00550
Peptidoglycan biosynthesis
parq01100
Metabolic pathways
parq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSM112329_02960 (mrdA_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSM112329_02960 (mrdA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parq01011
]
DSM112329_02960 (mrdA_2)
Enzymes [BR:
parq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSM112329_02960 (mrdA_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
parq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DSM112329_02960 (mrdA_2)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XAY06098
UniProt:
A0AAU7AWU1
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Position
complement(3048642..3050741)
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AA seq
699 aa
AA seq
DB search
MIDPVPGDRRPAVSPQLALRISAVGLVAFLLFSVLFFRLWYLQVLDGDSYRVQANSNRSR
VETLPAARGSIVDRNGEPLVQNTAAVVARLRPDSLPASEKEAAADYGDKVIERAKLSKRR
QGPEISIPAVPPDFAPRVQRLARTLGMRVATIQERIIRGLFLAGYAPVTIKANLPEDVAG
FILERPKQFPGVETPQVLLRAYPQRSLAAQIFGTTNQISPEQLKERYYRERKVRPGTVIG
RSGVEAAFDDYLRGTDGRQTLRVDAQGNPRGNGRVIEPTPGRGVQLTLDLDLQKAADAAY
RRVAGNLDGAFVALDPRNGAILATGSFPTYDPTLLARPISDRRYKAIFEPKDGSAGPLLD
RVSQSLYPAASTFKIVTALAGFDEGLITPSSTYADTGCIVFGGDKRRACNSGGGKGNGEI
NVATALKVSSDTFFYDLGLRLFEKRGEPLQKWARRLGFGRITGNDLGGETKGNVPDAAWR
RRVGQIEIDCRKKNKIPLSAPSDVAGTRNCGLYDVGPFTLGEAVNLAVGQGALQTNPLQL
AVAYAALANGGRIVRPHLGSKVIDDTGAVLQPIPAEKSRKIKIPAAFRSAIMDGLHRSAS
EPGGTSADVFSNSTPPWNQKRFPIFGKTGTAENVAQVIDQSWYVAYSYDRSPERKPIVVV
VTAEKGRFGADTAAPIARLILSAWFGVKAAVVRGASETK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggtccctggcgatcggcggccggcggtctcgccgcagctggcgctgcgc
atcagcgccgtggggctggtcgcgttcttgctcttctcggtgctgttctttcgcctgtgg
tacctgcaggtcctcgacggcgactcgtaccgtgtccaggccaacagcaaccgcagccgc
gtcgagacgctccccgccgcgcgcggctcgatcgtcgaccgtaacggcgaaccgctggtg
cagaacaccgcagcggttgtcgcacgcctgcgcccggactcgctgccggccagcgagaaa
gaagccgccgccgactacggcgacaaggtcatcgagcgcgcgaagctctcgaagcgccgg
caaggccccgagatctcgatcccggcggtgccgcctgacttcgcgccgcgcgtgcagcgc
ctcgcccgcacgctcgggatgcgtgtggcgacgattcaggaacgcatcatccgcgggcta
tttctcgcgggctacgccccggtcacgatcaaggccaacttgccagaggacgtcgccggg
ttcatcctcgagcggccgaagcagttccccggggtcgagacaccgcaggtgctcctgcgt
gcatatccgcagcggtccctggcggcgcagattttcgggacgacgaaccagatttccccc
gagcagctcaaggagcgctactaccgggagcggaaggtcaggccgggcaccgtcatcgga
cgcagcggcgtggaggctgctttcgacgactatctgcgcggcaccgatggccgtcagacg
ctccgtgtcgatgcgcagggcaatccgcgcggcaacggcagggtcatcgagccgaccccg
ggccgtggggtgcagctcacgctcgacctggaccttcagaaagcggcagacgccgcgtac
cggcgtgtcgccggcaacctggacggcgctttcgtcgcgctggacccgcgcaacggcgcg
atcctcgctacgggctcgtttcccacgtacgacccgacgttgctggccaggccgatcagc
gaccggcgctataaggcgatcttcgagccgaaggacggcagcgccggtccgctgcttgac
cgggtgtcgcagtcgctgtatccggccgcctcgacgttcaagatcgtcaccgctctcgcc
ggcttcgacgagggcctcatcaccccctcaagcacatacgcggacacgggctgcatcgtg
ttcggcggcgacaaacgcagggcgtgtaactccggcggtggcaagggcaacggcgagatc
aacgtcgcgacggcgctgaaggtctcctccgacacgttcttctacgacctcgggctgcgt
ctcttcgagaagagaggcgagccgctacagaaatgggcgcggcgcctcgggttcggccgc
atcactggaaacgacctcggcggagagaccaagggcaacgtccctgacgccgcatggcgc
aggcgcgtaggacagatcgagatcgactgccgcaagaaaaacaagattcccttgtcggcc
ccaagcgacgtcgccggcacccgaaactgcggcctgtatgacgtcgggcccttcaccctc
ggcgaggcggtcaacctcgctgtcggccagggagcgctgcagaccaaccccctgcagctc
gcggtcgcctacgccgccctggccaacggcggccgcatcgtccggccccacctcggctcc
aaggtcatcgacgataccggcgccgtcctgcagccgatcccagccgagaagagccgcaag
atcaagatcccagccgcgtttcgtagcgcgatcatggatggcctgcaccgctcggccagc
gagcccggcggcacctccgcggacgtgttcagcaactccaccccgccgtggaaccagaag
cgttttccgatcttcggaaagaccggcacggccgagaacgtcgcacaggtcatcgaccag
tcctggtacgtggcctactcctacgatcggtctcccgagcgcaaaccgatcgtcgtcgtg
gtcaccgccgagaagggccgcttcggcgccgacaccgccgcgccgatcgcccgcctgatt
ctctccgcttggttcggtgtcaaggccgcggtcgttcgcggcgcaagcgaaaccaaatag
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