Paraconexibacter sp. AEG42_29: DSM112329_03989
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Entry
DSM112329_03989 CDS
T10662
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
parq Paraconexibacter sp. AEG42_29
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parq03400
]
DSM112329_03989 (phrB)
Enzymes [BR:
parq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DSM112329_03989 (phrB)
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DSM112329_03989 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
XAY07110
UniProt:
A0AAU7AZP4
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All DBs
Position
complement(4115629..4117149)
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AA seq
506 aa
AA seq
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MPAPGRTRGVGHTALILGDQLLPDHPALDGADRVVLIESTAMLRRRPVHRQRAHVVLSAM
RHHADRLRADGIEVVEHRGAESLAGALEPHAGEDIVAAEPNDLGARRALDGLGVRQLPSA
QFLIAPEAFAGWAGGRRRLRMEDFYRDQRRAHRVLLDDGGEPLGGRWNFDADNRQPPPKT
GLEAPEPWAPDEDDIDAAVRADLDALAADGVAFFGDDAPRRYAVTPDEARSALADFVDHR
LRDFGPWQDAMADPSQPFLFHSLLSIPLNLGVLDPLTCVRAAEDAYHEHDLPISSVEGFV
RQVIGWREYVWGMYWLRAETWPDANALGAELPLPDGYRGTETGWKCLDTVVGGVAANGYA
HHIERLMVLGTIGLTAGIRPWELVRWFQTAFVDGAEWVMAPNAAGMALFADGGEMVTKPY
AAGGNYINKMSGHCKGCRYKPTEKHGERACPVTALYWDFVDTHTERLAANNRTARAVSTW
RRFDQPTREAVRERAVAARVELDGRG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccccggggcgtacccgtggtgtgggccacaccgcgttgatcctgggcgaccag
ctcctgccggaccatcccgcgctcgacggcgccgaccgtgtcgtgctcatcgagtccacg
gcgatgctgcgccgccggcccgtccaccgccagcgggcccacgtggtgctgagcgcgatg
cgccaccacgccgaccggctgcgcgcggacggcatcgaggtcgtggagcaccgcggcgca
gagtcgctggccggcgccctcgagccgcacgcgggggaggacatcgtggccgccgagccg
aacgacctgggcgcgcgacgggcgctcgacgggctcggcgtccggcagctgccgtcggcg
cagttcctgatcgcgcccgaggcgttcgcgggctgggccggcggccgccggcggctgcgg
atggaggacttctaccgtgaccagcgccgcgcgcaccgggtcctgctggacgatggcggc
gagccgctcggcggccgctggaacttcgacgccgacaaccggcagccgccgccgaagacc
ggcctggaggcccccgagccgtgggcgccggacgaggacgacatcgatgcggcggtccgt
gccgacctcgacgcgctcgcagccgacggagttgcgttcttcggcgacgacgcgccgcgg
cgctacgccgttaccccggacgaggcccgcagcgcgctcgcggacttcgtcgatcaccgc
ctgcgcgacttcggcccgtggcaggacgcgatggcggacccgtcccagcccttcctgttc
cactcgctgctgtcgatcccgctcaacctcggcgtcctggacccgctcacctgcgtgcgc
gcggcggaggacgcctaccacgagcacgacctcccgatcagctcggtcgagggcttcgtg
cggcaggtcatcggctggcgggagtacgtctgggggatgtactggctgcgggccgagacg
tggccggacgcgaatgcgctcggcgcggagctcccgctgccggacgggtaccgcggcacc
gagacgggctggaagtgcctggacaccgtggtgggcggcgtggccgccaacggatacgcg
caccacatcgagcggctgatggtcctgggcacgatcggcctgacggcgggcatccgcccg
tgggagctcgtgcgctggttccagaccgcgttcgtggacggcgcggagtgggtgatggcg
ccgaacgccgccggcatggccctcttcgccgacggcggcgagatggtgaccaagccgtac
gccgcgggcggcaactacatcaacaagatgtcgggccactgcaagggctgccgctacaag
ccgaccgagaagcacggcgagcgcgcctgcccggtgaccgcgctctactgggacttcgtc
gacacgcacaccgagcgcctggcggcgaacaaccgcaccgcccgggcggtcagcacgtgg
cggcggttcgaccagcccacgcgggaagccgtccgcgagcgggccgtcgcggcacgggtg
gagctcgacggtcgcgggtag
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