Paraconexibacter sp. AEG42_29: DSM112329_04670
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Entry
DSM112329_04670 CDS
T10662
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03440
Homologous recombination
Brite
Enzymes [BR:
parq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSM112329_04670 (recB)
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSM112329_04670 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAY07780
UniProt:
A0AAU7B198
LinkDB
All DBs
Position
complement(4834425..4837913)
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AA seq
1162 aa
AA seq
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MSGERTLRSAVEPFDVLGPLPSGVAVLEASAGTGKTFTIAALAARYVAEGLVTLDQLLLV
TFTRMATGELRERVRERLVSAERILGAVLDGGPVPSGDTVAALLADGTSEQVTDRRRNLA
RAVADFDAATITTTHGFCLEALGSLGFAGDVASDCAFVEDVGELIDEVVDDLYIRAFWQQ
ATQVLSEDEARRVAREAIENPSAVLLPVSPLSPKEARDRPGEDKPWAMRARLANAAREVL
AQRKRDTQVMTYDDLLTRLKATLEDPKGGPAVAERLRARYRVVLVDEFQDTDRDQWAIMN
AAFGHPGGTLILIGDPKQAIYAFRGADVYSYLEAADAAVTVKTLAENWRSDQDLITAYDE
LFAGAQLGHENIVYRDVKATKLNRARRLHGAPESAPLRIRVVDRSRPPITLTQTGAAQVG
SVREHIAADVANDIVRLLASGAEIDVKTDEHGGRSRRPVVPGDVAVLVRRNFDAATIRER
LDAAGVPAVINGAGSVFEGRPAQDWLALLQALERPTSARDARAVALTAFLGWTAAAVAAA
DDAAWEGVHRRLHRWAHVLREAGVASLLETITLQEQLPPRVLRTHDGERELTDLRHIGQL
LHRVATEEHLGVAALATWLRQRIAEVARETDEERSRRLESDAAAVQVLTIHRSKGLEFPV
VYYPSLWDPSPIAKKGQPVFFHDPANGDRRTLDVGLDGSPDFQKHRVRHRDEIRGEDLRL
AYVALTRAQHQAVVWWAGTHDSRGSALSRLLFDRGPGGAVKAQGPDRVQPDAAAAARLRE
LAAAAPGCIAVESSVPVRATDRWATTPPAAPALSAATLDRTIDRTWRRTSYSDITSAAHD
LRVASEPEEGLVDDEPDADGSAPVDSADAASAAATADAALRAEPSLLADMPGGVDIGTLV
HNLLEAADFAAPDLEAEVAARLAEQRARRALDVGDPAVVVAGLVAGLRTPLGPLADDLRL
ADLTRADRLDELAFELPLAGGETPTGVVTPGAIAAVLRRHLDPGDPLHGYADRLADPALR
AALAGYLTGSIDLAFRVTSGAAHGGRPRFGIVDYKTNRLGDPLQPLTQWDHRPAAISAEM
YRSHYALQGLLYTVALHRYLRLRVPGYDPATDIAGVFYLFMRGLAGPATPRMDGTPFGVF
AWRPPGALVTDLSDLLERGASR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtgagcgcaccctgcggtcggccgtcgagccgttcgacgtcctcgggccgctg
ccctccggcgtcgccgtgctcgaagcgagcgcggggacgggcaagacgttcacgatcgcc
gcgctcgccgcgcgctacgtcgccgagggcctcgtcaccctcgaccagctgctgctcgtg
acgttcacgcggatggcgaccggcgagctgcgcgagcgtgtccgcgagcggctggtcagc
gccgagcggatcctcggcgccgtcctggacggcgggccggtcccgtccggggacacggtc
gccgcgctgctggccgacggcaccagcgagcaggtcacggaccgccggcgcaacctcgcc
cgcgccgtcgcggacttcgacgccgccaccatcacgaccacgcatggcttctgcctggag
gcgctgggcagcctcgggttcgccggggacgtggcgtccgactgcgcgttcgtggaggac
gtcggcgagctcatcgacgaggtcgtcgacgacctctacatccgcgcgttctggcagcag
gccacccaggtgctgagcgaggacgaggcgcggcgtgtcgcgcgcgaggcgatcgagaac
ccgtccgccgtgctgctgccggtctccccgctcagcccgaaggaggctcgcgaccggccg
ggcgaggacaagccgtgggcgatgcgcgcccgcctcgcgaacgccgcccgcgaggtcctc
gcgcagcgcaagcgcgacacgcaggtcatgacctacgacgacctgctcacccggctgaag
gccacgctcgaggacccgaagggcgggcctgcggtggcggaacggctgcgcgcgcgctac
cgcgtcgtgctggtcgacgagttccaggacaccgaccgcgaccagtgggcgatcatgaac
gcggcgttcggccatcccggcggcacgctgatcctgatcggcgacccgaagcaggccatc
tacgcgttccgtggcgccgacgtctactcctacctggaggcggccgacgccgcagtgacg
gtgaagaccctcgcggagaactggcgcagcgaccaggatctgatcacggcctacgacgag
ctcttcgccggtgcgcagctcggccacgagaacatcgtgtaccgggacgtcaaggcgacg
aagctgaaccgggcgcgccggctgcacggcgcccccgagtccgcgccgctgcgcatccgc
gtcgtcgaccgctcccggccgcccatcacgctgacccagaccggggcggctcaggtcggc
agcgtccgcgagcacatcgccgcggacgtggcgaacgacatcgtccgcctgctcgcgtcc
ggcgcggagatcgacgtgaagaccgacgagcacggcgggcggtcccgtcgtcccgtcgtc
cccggcgacgtcgccgtcctcgtccgccgcaacttcgacgccgcgacgatccgcgagcgc
ctggacgcggccggcgtgcccgccgtgatcaacggggccgggagcgtcttcgagggccgg
ccggcgcaggactggctcgcgctgctgcaggcgctggagcggcccacgtcggcccgggac
gcgcgcgccgtcgcgctcaccgccttcctgggctggacggccgcggccgtcgcggcggcg
gacgacgcagcgtgggagggggtccaccgccggctgcaccgctgggcccacgtcctgcgc
gaggccggcgtcgcctcgctgctggagacgatcaccctgcaggagcagctgccgccgcgg
gtgctgcggacccacgacggtgaacgcgagctcaccgacctgcgccacatcgggcagctg
ctgcaccgcgtggcgacggaggagcacctcggggtcgcggcgctcgcgacgtggctgcgg
cagcgcatcgccgaggtcgcgcgggagaccgacgaggagcgcagccggcgcctggagtcc
gacgccgccgccgtgcaggtgctgacgatccaccgcagcaagggcctcgagttccccgtc
gtctactacccgtcgctctgggacccttcgccgatcgcgaagaagggccagccggtcttc
ttccacgacccggcgaacggggaccggcgcacactcgacgtcgggctggacgggtccccc
gacttccagaagcaccgcgtccgccacagggacgagatccgcggggaggacctgcgcctc
gcctacgtcgcgctcacccgggcgcagcaccaggccgtcgtctggtgggcgggaacgcac
gacagccggggctcggcgctcagccggctgctgttcgaccgcggtcccggcggggccgtc
aaggcgcagggaccggaccgcgtgcagcccgacgcggccgcggccgcgcgcctgcgcgag
ctcgcggcggcggccccggggtgcatcgcggtcgagtcgtcggtccccgtccgggcgacg
gaccgctgggcgacgacacccccggccgcgccggcgctctccgccgcgacgctcgaccgc
acgatcgaccggacctggcggcggacgtcctacagcgacatcacgagcgcggcgcacgac
ctgcgcgtcgcgagcgagccggaggagggactggtcgacgacgagccggacgcggacggg
tccgcaccggtcgactccgccgacgcggcgtcggcggccgccaccgccgacgccgcgctg
cgcgccgagccgtcgctgctggccgacatgccgggcggggtcgacatcgggacgctcgtc
cacaacctgctggaggccgccgatttcgccgccccggacctggaggccgaggtcgccgcg
cggctggccgagcaacgtgcccgccgggcgctcgacgtcggtgacccggccgtcgtcgtc
gccggtctggtggcgggcctgcgcacgccgctcggcccgctcgcggacgacctgcggctc
gcggacctcacgcgtgccgaccgcctcgatgagctcgcgttcgagctgcccctcgccggt
ggtgaaacgccgaccggcgtcgtcaccccgggcgcgatcgccgccgtcctgcgccggcac
ctggacccgggcgacccgctccacggctacgcggaccggctcgccgacccggccctgcgg
gcggcgctggccggctacctgaccggcagcatcgacctcgccttccgggtgacgagcggg
gccgcgcacggcggccggccgcgcttcggcatcgtcgactacaagaccaaccgcctcggc
gacccgctgcagccgctcacccagtgggaccatcgtcccgccgcgatcagcgccgagatg
taccggtcgcactacgcgctgcagggcctgctctacacggtcgcgctgcaccgctacctg
cgcctgcgcgtccccggatacgacccggcgacggacatcgccggcgtcttctacctcttc
atgcgcgggctcgccgggccggcgacgccgcggatggacgggacgccgttcggcgtcttc
gcgtggcgtccgcccggtgcgctggtgaccgacctcagcgacctgctggagcggggtgcg
tcccgatga
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