Paraconexibacter sp. AEG42_29: DSM112329_05206
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Entry
DSM112329_05206 CDS
T10662
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
parq Paraconexibacter sp. AEG42_29
Pathway
parq03420
Nucleotide excision repair
parq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM112329_05206
03430 Mismatch repair
DSM112329_05206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parq03400
]
DSM112329_05206
Enzymes [BR:
parq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM112329_05206
DNA repair and recombination proteins [BR:
parq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM112329_05206
MMR (mismatch excision repair)
Other MMR factors
DSM112329_05206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
SLFN-g3_helicase
Cas_Cas4
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XAY08308
UniProt:
A0AAU7B2Y6
LinkDB
All DBs
Position
5487558..5490752
Genome browser
AA seq
1064 aa
AA seq
DB search
MSPDPLAVLTESQQAAATHRGGPLVVLGGAGTGKTSALLARFAHLTSPEGDVAPEQVLML
TGGEAAADELRARVEDVLGDRGFAELAVHTPSGFAARLLREEAMEAGIDPTIGMATSADR
LALLLARIDELPLKVHDLAGRPAATLARLLARIDRSKEQLVSADAFRAWADGLADDDART
VREREFAALYGAHDALLAQLDLLDSGDLVLRAHALLAGRPHVLARAAARYRHVLADDHQD
ATPAAHALIALLGSANGTLTLAGDDDQAVRRTGPTRPPGMDALRGDEPKATVIRLERSFR
CRARIITAAQAVVAQAPERLPKRLEGEGGGNVRFWRCANERAQAQGVAAEIERLIREGVP
PEGIGVLVRSVRNEGQAVAVALEERAVPYRIVGAAAFFQRTEVRDVLAWLRLLVEPGDAA
AVVRVLARPPVELRAVDLARCVQIARRRKLDMVSALGAAMESPQLPPEARERILAFLKLH
RQTAAALDTMRPDLFVHRLIDRLGLRRQQLFAAQADVVERLLALARLGELAAAHTARTPT
ATARDFARYLTAVADAGLRDEEELDESAAAPRGAVAVLAMHGARGVELQHAFVLGLQSSR
MPGARQELVEPVPAELLDGSRAIEDDRAHHVAHMRRLLHVAMTRAQSGLVLAYAAASDRG
ARQPPSPFAEEARAALGAGWEDREEILFGPDEALHATYATLRDELLSSVSRVGSRLGELR
LDTDLDVTHGVTRYLELVKLAAILERPAGQSVRDAIVDVNSKILQPVSAHQREVFTSSGL
DELLLNAEADARARAAVIADRAEPSLEPFLPKRGDGLMLSASDIETYRSCPLKYKFARVF
RIPSESTMNQRFGILFHQVLERFHGTAPAEAYGAAVAMAEPGSVGQLLGLLDAGWRRGGF
GDTEEERQFRAKAVAALHSYHARFTAEQAEPMWLEKGFQFKLGPHVLRGRVDRVDRLADG
SYELIDYKTGRPRTVAQLREDVQLSLYAVGAREAWQLESSRQAYHYVLDDQKVRVPAEDL
DRDWITDTVMHVADGILSQGFEPTPSFSACSMCDYRIACPAAER
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcccgaccccctcgcagtcctcacagaatcccagcaggccgcagcgacgcaccgc
ggcggcccccttgtcgtgctcggcggggccggcaccgggaagacgtccgcgctcctggcg
cgtttcgcccatctgacgtcccccgagggcgatgtggcccccgagcaggtcctgatgctg
accggcggcgaggccgcggcggacgagctgcgcgcccgggtcgaggacgtcctgggcgac
cgcggcttcgcggagctcgcggtccacacgccgtccggcttcgcggcgcggctgctgcgc
gaggaggcgatggaggcgggcatcgacccgacgatcggcatggcgaccagcgccgaccgc
ctggcactgctgctggcgcggatcgacgagctgccgctgaaggtgcacgacctcgccggc
cggcccgcggcgacgctcgcccggctgctggcgcggatcgaccgcagcaaggagcagctg
gtcagcgccgacgcgttccgtgcctgggcggacgggctggcggacgacgacgcgcggacc
gtccgcgagcgcgagttcgccgcgctctacggcgcccacgacgcactgctcgcacagctg
gacctgctcgacagcggcgacctggtcctgcgtgcccacgcgctgctcgccggccgcccg
cacgtcctcgcccgcgccgccgcccgctaccgccacgtcctcgccgacgaccaccaggac
gccaccccggccgcccacgcgctcatcgcgctgctcgggtcggccaacgggacgctcacc
ctcgcgggcgacgacgaccaggccgtgcgccgcaccgggccgacccggccgcccggcatg
gacgccctccggggcgacgagccgaaggcgacggtgatccgcctggagcgctcgttccgc
tgccgcgcgcgcatcatcaccgccgcgcaggcggtcgtcgcccaggcccccgaacggctg
ccgaagcgcctggagggcgagggcggcggcaacgtccgcttctggcgctgcgcgaacgag
cgcgcccaggcgcagggcgtcgcggcggagatcgagcggctgatccgcgagggcgtcccg
ccggagggcatcggcgtcctggtgcgttccgtccgcaacgagggccaggccgtggcggtc
gcgctcgaggagcgggcggtgccctaccgcatcgtcggcgcggcggccttcttccagcgg
accgaggtccgcgacgtgctggcctggctgcggctcctcgtcgagcccggcgacgcggcg
gcggtcgtccgcgtcctggcccggccaccggtcgagctgcgcgcggtcgacctcgcccgc
tgcgtgcagatcgcgcgccggcgcaagctcgacatggtcagcgcgctgggggcggcgatg
gagtcgccgcagctcccgccggaggcccgcgagcggatcctcgcgttcctcaagctgcac
cgccagaccgccgcggcgctcgacacgatgcggccggacctcttcgtccaccgcctgatc
gaccggctcgggctgcgccgccagcagctcttcgccgcacaggccgacgtcgtcgagcgg
ctgctcgcgctggcgcggctcggggagctcgccgccgcccacacggcccggacccccacc
gcaacggcacgggacttcgcccgctacctgaccgctgtggcggacgcgggcctgcgcgac
gaggaggagctcgacgagtccgcggccgccccgcgcggcgccgtcgccgtcctcgccatg
cacggcgcgcggggggtcgagctgcagcacgcgttcgtgctcggcctgcagtcctcgcgg
atgccgggcgcgcggcaggagctcgtcgagcccgtcccggccgagctgctcgacggctcc
cgggcgatcgaggacgaccgggcccaccatgtcgcgcacatgcggcgcctgctccacgtc
gcgatgacccgggcgcagagcggcctcgtgctcgcctacgccgccgcgtccgaccgcggt
gcacgccagccgccctcgccgttcgccgaggaggcgcgcgcagcgctcggcgccggctgg
gaggaccgcgaggagatcctgttcggccccgacgaggcgctgcacgccacctacgcgacg
ctccgggacgagctgctctcgtcggtctcgcgcgtcggctcgcgcctcggggagctgcgg
ctggacaccgatctcgacgtgacccacggcgtcacccgctacctggagctcgtcaagctc
gccgcgatcctcgagcggcccgccgggcagtccgtccgcgacgcgatcgtcgacgtcaac
tcgaagatcctgcagccggtgtccgcccaccagcgggaggtcttcacgagcagcgggctg
gacgagctgctgctgaacgcggaggcggacgcgcgggcccgcgcggcagtgatcgccgat
cgcgccgagccgtccctcgagccgttcctgcccaagcgtggcgacggcctgatgctgagc
gcgtcggacatcgagacctaccgctcgtgcccgctgaagtacaagttcgcgcgcgtcttc
cggatcccgagcgagtcgacgatgaaccagcgcttcgggatcctgttccaccaggtgctg
gagcgcttccacggcaccgcgcctgcggaggcctacggcgccgcggtcgcgatggcggag
cccgggtcggtcgggcagctgctgggactgctcgacgccggctggcggcgcggcggcttc
ggcgacaccgaggaggagcggcagttccgggcgaaggccgtggccgcgctgcacagctac
cacgcgcggttcacggcggagcaggccgagccgatgtggctcgagaagggcttccagttc
aagctcgggccgcacgtgctgcgcggccgggtggaccgcgtcgacaggctcgccgacggc
agctacgagctgatcgactacaagaccggccgcccgcggaccgtcgcgcagctgcgcgag
gacgtgcagctgtcgctgtacgccgtcggtgcccgcgaggcgtggcagctcgagtcctcg
cgccaggcctaccactacgtcctcgacgaccagaaggtccgcgtcccggccgaggacctg
gaccgcgactggatcaccgacaccgtcatgcacgtcgccgacggcatcctgtcgcagggc
ttcgagccgacgccgtcgttcagcgcgtgctcgatgtgcgactaccgcatcgcctgcccg
gcggccgaacgttag
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