Paracoccus sp. Arc7-R13: EOJ32_01830
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Entry
EOJ32_01830 CDS
T06050
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
parr
Paracoccus sp. Arc7-R13
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parr03400
]
EOJ32_01830 (addB)
Enzymes [BR:
parr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EOJ32_01830 (addB)
DNA repair and recombination proteins [BR:
parr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EOJ32_01830 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AZY92536
LinkDB
All DBs
Position
368377..371325
Genome browser
AA seq
982 aa
AA seq
DB search
MAEMRGLYALPPGVDFADAFVRGLLERMADQPPEALAGVTVFVNAASTRGALYRAFDRAG
PLLLPQIRSITGVDPGPLVMPDPPVPPLARRLELARLIAQMLAMRPDLGAGHSIPVLAQS
LSQLMVEMQTEGRDLSDLEAIDTGDHARHWQNALAFLRIAAQFHLGDPSQDRPARQRAAA
QAAARDWPQGIDLPQGPVIVAGSTGSHGATRLYMQAVAALPNGAVVLPGFDFDQPAPVWD
GLERADDHPQARFAPLIAEAGYPQRWTAVRPPSEGRNRLISLALRPAPVTDQWIAEGPAL
PDLIAATADLTLIEADQPGQEAETIALIMRDAAERGGEQVTLIAADSGLIRRVTAALDRW
HIRPDDSAGRPLPLTAPGLFLRQVAALFGQPLTIDRLLILLKHPLTATGSTAIGRNDMLR
ETRELELQLRRNGPAFPDAATLADWATKGDGTRKIWAEWLAAMLSRITAVARDRAPRPLP
HRLADLLDLAQALAAGPDGDAERSQLWQDKAGQMARAVLDHLVEHAALGPDIGPGDFSAL
LVTELQAKAVRDDVEAHHCLRIHGPREARLHGHGTVILSGLNEGGWPQALSPDPWLSRQM
RAAAGLPLPERQIGLAAHDFQQAVAADRVYLTRAKRDAEAETIPSRWLNRMLNLMGGLPD
RGGPEALARMRARGAEWLALAQAVARPPAPVPPAARPSPIPPLPLFPDLPVTDVSLLIRD
PYAVYAKRVLGLRALPPLRPQPDASLRGQTLHAIVEALLHSHPTPDTPPEVLRDRFLALT
DRVLADEVPWPAARAFWSARIARIADRIVADELTRLAEGRPMVVEHRGKVPVADLGITLT
AKPDRIDLLTDNRVVVYDYKSGTPPTDAMIRHFDKQLMLEAAMARRGGFDALGPVDVAGL
RYIQLGGEGKTHPREHDDLIEAETWDGFVRLLRSYVTGEAGFTAMRAPQSTSYASDYDHL
ARYGEWALTDAAAPRKVGDHHG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgcgcggtctttacgcgctgccccccggcgtggattttgccgacgccttc
gtgcggggcctgctggagcggatggcggaccagccgcccgaggcgctggccggggtcacc
gtcttcgtcaacgccgcgtccacgcgcggggcgctgtatcgtgccttcgacagggcgggg
ccgctgctgctgccgcagatccggtcgatcaccggggtcgatccggggcccctggtcatg
ccggacccgccggtgccgcccctggcgcggcggctggaactggcgcggctgatcgcgcag
atgctggccatgcgtcccgatctgggggcgggtcattcgatcccggtgctggcgcagtcc
ctgtcccagctgatggtcgagatgcagaccgaaggccgcgacctgtccgacctggaggcg
atcgacaccggcgatcatgcccgccactggcagaacgcgctggccttcctgcgcatcgcg
gcccagtttcacctgggcgacccgtcccaggaccgccccgcccgccagcgcgccgcggcc
caggccgccgcccgcgactggccgcagggcatcgatctgccgcagggcccggtgatcgtc
gcggggtcgaccggatcgcacggggcgacgcggttgtacatgcaggcggtggccgcgctg
cccaacggcgccgtggtgctgcccggtttcgatttcgaccagcccgccccggtctgggat
gggctggagcgcgccgacgatcatccgcaggcgcggttcgcgccgctgatcgcggaggcg
ggctatccccagcgctggaccgcggtgcggccgccatccgaggggcgcaaccggctgatc
tctctggcgctgcggcccgcgccggtcaccgaccagtggatcgccgagggccctgccctg
cccgacctgatcgccgccaccgcggatctgaccctgatcgaggccgaccagcccggccag
gaagccgagaccatcgccctgatcatgcgcgacgccgccgaacgcggcggcgaacaggtc
acgctgatcgcggccgacagcggcctgatccggcgcgtcaccgcggcgctggaccgctgg
cacatccgccccgacgacagcgcgggccggcccctgccgctgaccgcgccgggcctgttc
ctgcgccaggtggccgcgctgttcggtcagccgctgaccatcgaccggctgctgatcctg
ctgaagcatccgctgaccgcgaccggatcgaccgcgatcgggcgcaacgacatgctgcgc
gagacgcgcgagctggaactgcagctgcgccggaacggcccggcctttcccgatgccgcc
acgctggccgattgggcgaccaagggcgacggcacgcgcaagatctgggcggaatggctg
gccgcgatgctgtcgcgcatcaccgccgtggcccgcgaccgggcgccgcggcccctgccc
catcggctggccgacctgctggacctggcacaggccctggcggcgggaccggatggcgat
gcggaacgctctcagctgtggcaggacaaggccgggcagatggcccgcgcggtgctggac
catctggtggaacacgcggcgcttggccccgacatcggcccgggcgacttcagcgcgctg
ctggtcaccgaactgcaggccaaggcggtgcgcgacgatgtcgaggcgcatcactgcctg
cgcatccacggcccgcgcgaggcgcgtctgcacggccacggcaccgtgatcctgtccggc
ctgaacgaggggggctggccgcaggccctgtcgcccgacccctggctgtcgcgccagatg
cgcgccgccgcgggcctgcccttgcccgaacgccagatcgggctggcggcgcacgacttt
cagcaggccgtggctgccgaccgggtctatctgacccgcgcgaaacgcgatgccgaggcc
gagaccatcccgtcgcgctggctgaaccggatgctgaacctgatgggcgggctgccggat
cgcggcggtccagaggcgctggcccggatgcgggcgcgcggcgcggaatggctggccctg
gcgcaggccgtggcgcgaccccccgccccggtgcccccggcggcgcggccctcgcccatc
ccgccgctgcccctgttcccggacctgccggtgacggacgtgtcgctgctgatccgcgac
ccctacgcggtctatgccaagcgcgttctgggcctgcgcgcgctgccgccgctgcgcccg
cagcccgacgcgtcgctgcgcggccagaccctgcatgccatcgtcgaggcgctgctgcac
agccatcccacccccgacaccccgcccgaggttctcagggaccggttcctggcgctgacc
gaccgggtgctggcggacgaggtgccctggcccgccgcccgcgccttctggtcggcgcgc
atcgcacggatcgccgaccgcatcgtcgcggacgagctgacccgcctggccgaggggcgg
ccgatggtcgtggagcatcgcggcaaggtgcccgtggcggacctgggcatcaccctgacc
gccaagcccgaccggatcgacctgctgaccgacaaccgcgtcgtggtctatgactacaag
tccggcacgccgccgaccgacgcgatgatccgccatttcgacaagcagctgatgctggag
gccgcgatggcgcgccgtggcgggttcgacgcgcttggcccggtggacgtggcgggcctg
cgctacatccagctgggcggagagggcaagacccacccgcgcgagcatgacgacctgatc
gaggccgagacctgggacggcttcgtccgcctgctgcggtcctatgtgaccggagaggcc
gggttcaccgcgatgcgtgcgccccaaagcacgtcctatgcaagcgattacgatcacctg
gcgcggtacggcgaatgggcgctgaccgatgccgcggcgccgcgaaaggtgggcgatcat
catggatga
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