Paracoccus sp. Arc7-R13: EOJ32_02390
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Entry
EOJ32_02390 CDS
T06050
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
parr
Paracoccus sp. Arc7-R13
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parr03032
]
EOJ32_02390 (gyrB)
03400 DNA repair and recombination proteins [BR:
parr03400
]
EOJ32_02390 (gyrB)
Enzymes [BR:
parr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EOJ32_02390 (gyrB)
DNA replication proteins [BR:
parr03032
]
Prokaryotic type
DNA Topoisomerases
EOJ32_02390 (gyrB)
DNA repair and recombination proteins [BR:
parr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EOJ32_02390 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AZY92637
UniProt:
A0A3T0PYF9
LinkDB
All DBs
Position
complement(486200..488635)
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AA seq
811 aa
AA seq
DB search
MTDTAAQPALYDADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEVLAG
HADFVQVKIHADSSVSVRDNGRGIPVDMHAGEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRNDKEHFVRFERGDTVKSLVVVGDAPGESGTEVRFMASA
KTVHPDGTFSNLDYSFKTLENRLRELAFLNSGVRIILEDERHAEVQKTELFYEGGVKEFV
KYLDRSKTAVMPEPIFITGEKGGIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHMAGFR
GALTRVIGKYAQDSGIAKKEKVDFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVR
PAVEGLVGEKLAEWFEENPTEARQIVGKIIEAALAREAARKARELTRRKTAMDVASLPGK
LADCQEKDPALSELFIVEGDSAGGSAKQGRSRQNQAVLPLRGKILNVERARFDRMLGSDQ
IGTLITALGTGIGRDEFSLKKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGH
LYIAQPPLYKVGRGRSEVYLKNEAALEDYLIQQGVEGASLRLASGEEITGNDLARVVEEA
RVARRVLRAYPTHYPPHITEQAAIAGALVPGRIDQDAQGVATDIAARLDQIAEEYERGWQ
GRPTQDAGIRLSRTLRGVEENRTLDGQMLRSGESRRLGEMTQALQDIYAKPARLIRKDRD
QPIHGPLGLLQAVFLEGEKGLSLQRYKGLGEMNPEQLWETTLDPVARTMLQVRIEDVAEA
EDLFTKLMGDVVEPRREFIQQNALNVENLDT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccgcccaacccgctttgtacgacgccgattccatcaaggttctcaag
ggtttggacgccgtgcgaaagcgtcccggcatgtatatcggcgataccgacgacgggtcc
ggcctgcaccacatggtttatgaggtcgtggacaacggcatcgacgaggtcctggccggc
catgccgacttcgtgcaggtcaagatccatgccgacagcagcgtcagcgtgcgcgacaac
gggcgcggcatcccggtcgacatgcatgccggagaaggcgtcagcgcggccgaggtcatt
atgacccagctgcatgcaggcggaaagttcgaccagaacagctacaaggtgtcggggggc
ctgcacggcgtgggcgtgtcggtcgtgaacgccctgtccgactggctggagctgcgcatc
tggcgcaacgacaaggagcacttcgtccggttcgagcgcggcgacaccgtcaagtcgctg
gtcgtggtgggcgatgcgccgggtgaaagcgggaccgaggtgcgcttcatggcctcggcc
aagaccgtgcatccggacgggaccttcagcaacctggactatagcttcaagacgctggag
aaccgcctgcgcgagctggccttcttgaacagcggcgtgcgcatcatcctggaggacgag
cgtcatgccgaggtccagaagaccgagctgttctacgagggcggcgtcaaggaattcgtg
aaatacttggaccggtccaagaccgccgtcatgcccgagccgatcttcatcaccggagag
aagggcggcatcggcgtcgaggtcgcgatgtggtggaacgacagctatcacgagaccgtc
ctgcccttcaccaacaacatcccgcagcgggacggcggcacgcacatggccggtttccgc
ggcgccctgacccgcgtgatcggcaaatacgcgcaggacagcggcatcgcgaagaaagaa
aaggtcgacttcaccggcgatgacgcgcgcgaggggctgacctgcgtgctgtccgtcaag
gtgcccgatccgaagttctccagccagactaaggacaagcttgtctccagcgaggtccgt
ccggcggtcgaggggctggtcggcgagaagctggcagagtggttcgaggagaacccgacc
gaggcccgccagatcgtgggcaagatcatcgaggccgccttggcccgcgaggcggcgcgc
aaggcgcgcgagctgacgcggcgcaagacggcgatggacgtggcatccctgcccggcaag
ctggccgattgccaggagaaggacccggcgctgtccgagctgttcatcgtcgagggggat
tcggccggcggttcggcaaaacagggccgctcgcgccagaaccaggccgtcctgccgctg
cgcggcaagatcctgaacgtggaacgcgcgcggttcgaccggatgctgggcagcgaccag
atcggcacactgatcaccgcgcttggcaccggcatcgggcgcgacgagttcagcctgaag
aagctgcgctaccataagatcgtcatcatgacggacgccgacgtcgacggcgcgcatatc
cgcacgctgctgctgacgttcttcttccggcagatgccggagctgatcgagggcgggcat
ctctatatcgcgcagccgccgctctacaaggtcgggcgcggccggtccgaggtctatctg
aagaacgaggccgcgctggaggattacctgatccagcagggcgtcgaaggggcatccctg
cgcctggcctcgggcgaggagatcaccggcaacgacctggcccgcgtggtcgaggaggcg
cgggtggcacgccgcgttctgcgcgcctatccgacccactacccgccccacatcaccgaa
caggccgcgatcgccggggcgctggtgccgggccgcatcgaccaagacgcccagggcgtg
gccaccgacatcgccgcccgcctggaccagatcgccgaggagtacgagcgcggctggcag
ggacgcccgacccaggatgccggcatccgcctgtcgcgcaccctgcgcggggtcgaggag
aaccgcaccttggacggccagatgctgcgcagcggcgagagccgcaggctgggcgagatg
acccaggccctgcaggacatctatgccaagcccgcgcgcctgatccgtaaggatcgcgac
cagccgatccacggccccctgggcctgctgcaggcggtgttcctggagggcgagaagggc
ctgtccctgcagcgctacaagggactgggagagatgaaccccgagcagctgtgggaaacc
acgctggaccccgtcgcacgcaccatgctccaggtccgcatcgaggacgtggccgaggcc
gaggacctgttcaccaagctgatgggcgacgtcgtcgaaccgcgccgcgagttcatccag
cagaacgccctgaacgtcgagaacctggatacctga
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