KEGG   Paracoccus sp. Arc7-R13: EOJ32_05030
Entry
EOJ32_05030       CDS       T06050                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
parr  Paracoccus sp. Arc7-R13
Pathway
parr03030  DNA replication
parr03410  Base excision repair
parr03420  Nucleotide excision repair
parr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:parr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EOJ32_05030 (polA)
   03410 Base excision repair
    EOJ32_05030 (polA)
   03420 Nucleotide excision repair
    EOJ32_05030 (polA)
   03440 Homologous recombination
    EOJ32_05030 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:parr03032]
    EOJ32_05030 (polA)
   03400 DNA repair and recombination proteins [BR:parr03400]
    EOJ32_05030 (polA)
Enzymes [BR:parr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EOJ32_05030 (polA)
DNA replication proteins [BR:parr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EOJ32_05030 (polA)
DNA repair and recombination proteins [BR:parr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EOJ32_05030 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EOJ32_05030 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AZY93115
LinkDB
Position
1009363..1012161
AA seq 932 aa
MGERFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWRYVQTDDGHT
APTHAAVIFDHSSKTFRNEIYPAYKAQRPEPPEDLRPQFPLTRDATRAFNIACIETEGYE
ADDIIAAMACAARNAGGTATIISSDKDLMQLIGDGVDMLDPIKNKLIGPDEVFEKFGVGP
DRVVDVQALAGDAVDNVPGAPGIGIKTAALLIQEYGDLETLLSRAEEIKQPKRRQTLIEH
ADQIRVSKRLVQLDCDTPLDVTLESLEVKAPDADRLLAFLSEMEFRTLTNRVAESLGAEA
PAVQAAPASEAPAAPDQPAIDTGGYETVTTPEALDAWIAAIREAGQVAIDTETTSLDEMQ
ADLVGISLAVAPGRACYIPLGHVAGGDDLFGQSARVAGQLDPAAVLAALKPVLEDAAILK
IGQNLKYDWKMLARHGVQMAPIADTMLMSYALNAGTHNHGMDELAERYLGHKCIPIKELI
GSGKSQIHFGQVAIDKAAPYAAEDADVTLRLFQHFAPMLPVEKVSTVYHTLERPMIPVLA
QMEMAGIRIDTDVLKRMSNAFAQKMAGLEDEIHGLAGQSFNIGSPKQLAEILFDKMGLSG
GKQGKTGAFSTSADVLEDLAAEGHDLPARVLDWRQISKLKSTYTDALPTYVNAETGRVHT
SYSITGAQTGRLSSTEPNLQNIPIRTEEGRRIRQAFIAPEGFRLVALDYSQIELRILAHV
ADIPALKQAFREGIDIHAMTASQMFGVPVEGMDPMIRRRAKAINFGVIYGISGFGLSRNL
RIPRAEAQSFIDTYFERFPEIRAYMDKTVADAKQDGYVTTLFGRRINTPGINTSGPAAGG
ARRAAINAPIQGAAADIIRRAMIRMPDAIRDLPARMLLQVHDELVFEVREDAVDDLIARA
RTIMEAAPEPSVRLSVPLVVDAGQGMNWAEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgggcgagcgtttcggcaagggctgtcatctgcatctgatcgacggatcggccttcatc
ttccgcgcctatcacgcgctgccgcccctgacgcgcaagtcggacgggctgccggtgggc
gcggtcgcggggttctgcaacatgctgtggcgctatgtgcagaccgatgacgggcatacc
gcgccgacccatgcggcggtgatcttcgatcattcctccaaaaccttccgcaacgagatc
tatcccgcctacaaggcgcagcgccccgaaccgcccgaggacctgcgcccgcaattcccg
ctgacccgcgacgcgacccgcgccttcaacatcgcctgcatcgagaccgagggctatgag
gccgacgacatcatcgcggccatggcctgcgcggcgcgcaatgccggcggcacggccacg
atcatcagcagcgacaaggacctgatgcagctgatcggcgatggcgtcgacatgctggac
ccgatcaagaacaagctgatcggccccgacgaggtcttcgagaagttcggcgtcggtccc
gaccgcgtcgtggacgtgcaggcgctggcgggcgatgcggtcgacaacgtgccgggtgcg
ccgggcatcggcatcaagaccgcggccctcttgatccaggaatacggcgatctggagacg
ctgctgtcgcgtgccgaggagatcaagcagcccaagcgccgtcagaccctgatcgagcat
gcagaccagatccgcgtcagcaagcgcctggtccagctggattgcgacacgccgctggac
gtgacgctggaatcgctagaggtgaaggcccccgatgcagaccgcctgctggccttcctg
tccgagatggagttccgcacgctgacgaaccgcgtggcggaatccctgggcgccgaggcc
ccggccgtacaggcggcccccgccagcgaggcgcccgcggcccctgatcaacccgccatc
gacaccggcggctatgagacggtgaccacgcccgaggcgctggacgcctggatcgccgcg
atccgcgaggcggggcaggtcgccatcgacacggaaaccacgagcctggacgagatgcag
gccgatctggtcggcatcagcctggcggtcgcgccggggcgggcgtgttacatccccctg
ggccatgtcgcggggggcgacgacctgttcggccagtccgcgcgggtggcggggcagctg
gaccccgccgccgtgctggccgcgctgaagccggtgctggaggatgccgcgatcctgaag
atcgggcagaacctgaaatacgactggaagatgctggcccgccacggggtccagatggcc
ccgatcgccgacacgatgctgatgtcctatgcgctgaacgcgggcacgcacaatcacggc
atggacgagctggccgaacgctatctgggccacaagtgcatccccatcaaggagctgatc
ggttcaggcaagagccagatccatttcggccaggtcgccatcgacaaggccgcgccctat
gcggcggaggatgctgatgtcacgctgcgcctgttccagcatttcgcgccgatgctgccg
gtggagaaggtctcgaccgtctatcacacgctggaacgcccgatgattccggtcctggcc
cagatggagatggcgggcatccgcatcgacaccgacgtgctgaagcgcatgtcgaacgca
ttcgcgcagaagatggccgggctggaggatgagatccacgggctggcggggcagagcttc
aacatcggcagccccaagcagctggccgagatcctgttcgacaagatgggactgagcggc
ggcaagcagggcaagaccggggcattttccaccagcgccgacgtgctggaggatctggcc
gccgaaggccacgacctgcccgcgcgggtgctggactggcgccagatcagcaagctgaaa
tcgacctataccgacgcgctgcccacctatgtgaatgccgagacggggcgggtccatacc
agctattcgatcaccggggcgcagacggggcggctgtcctcgaccgagccgaacctgcag
aacatcccgatccggaccgaggagggccgccgcatccgccaggccttcatcgcacccgag
gggttcaggctggtggctctggactatagccagatcgagctgcggatcctggcgcatgtg
gccgacatcccggcgctgaagcaagccttccgcgaggggatcgacatccacgccatgacc
gccagccagatgttcggcgtcccggtcgaggggatggaccccatgatccgcaggcgcgcc
aaggcgatcaatttcggcgtgatctacggcatctcggggttcgggctgtccaggaacctg
cgcatcccgcgggccgaggcgcagagcttcatcgacacctatttcgaacgcttccccgaa
atccgcgcctatatggacaagaccgtcgccgacgcgaagcaggacggatacgtcacaacg
ctgttcgggcggcggatcaacacgccgggcatcaacacctcagggcctgctgccgggggc
gcgcggcgcgcggccatcaacgcgccgatccagggggctgcggccgacatcatccgccgc
gcgatgatccgcatgcccgacgcgatccgcgacctgcctgcgcgaatgctgctgcaggtg
catgacgaactggtcttcgaggtgcgcgaggatgcggtggacgacctgatcgcccgcgcc
cggaccatcatggaggctgcgcccgaaccgtcggtgcgcctgtcggtgcccctggtcgtg
gatgcggggcaggggatgaactgggccgaggcgcactga

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