KEGG   Paracoccus sp. Arc7-R13: EOJ32_10310
Entry
EOJ32_10310       CDS       T06050                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
parr  Paracoccus sp. Arc7-R13
Brite
KEGG Orthology (KO) [BR:parr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parr03400]
    EOJ32_10310
DNA repair and recombination proteins [BR:parr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     EOJ32_10310
SSDB
Motif
Pfam: ResIII Helicase_C DEAD UPF0547 SWI2_SNF2 AAA_30 Lipase_GDSL_2 DZR_2 DZR AAA_22 Zn_Ribbon_1 ATP-grasp_5 SLFN-g3_helicase Cas3-like_C_2 zf-Tbcl_FmdE RUBY_RBDX Zn-C2H2_12
Other DBs
NCBI-ProteinID: AZY94013
LinkDB
Position
2075034..2076722
AA seq 562 aa
MRLRPRQKTFVERSVAALASRGNTLGVAPTGAGKTIMLSAVTGEMIGDGAKACVLAHRDE
LTAQNRAKFQRVVSGVATSVIDATEKSWGGQVAFAMVPTLARASNLADMPRLDLLVVDEA
HHAVADSYRRIIDRVREANPDARIFGVTATPNRGDKKGLREVFDNVADQVRLGELIASGH
LVPPRTFVIDVGVQDELRSVRKTMSDFDMAEVAGIMDRAPVTDEVIRHWKEKAGDRQTVV
FCSTVAHAEHVTEAFRAAGVSAALIHGDLAVETRKAILADYAAGDIRVVVNVAVLTEGWD
HPPTSCVVLLRPSSYKSTMIQMVGRGLRTVDPEEHPGIVKTDCIVLDFGTSSLIHGTLEQ
DVDLDGKTETGEAPTKTCPACEAEIPLAATECPLCGEAFPREELDAGEGGAAAPLSGFMM
TEIDLLKRSSFAWVDLYGMDDALMATGFAAWGGIFWLDGVWYAIGGAKGERPHLLGVGER
TVCLAQADDWLNTHETDESAFKTRSWLRQPPTEKQLQYLPPECRHDFGLTRYRASALMTF
GFNKRAIRQLIDRAASPERRAA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgcgcctgcgcccccgccagaagaccttcgtcgagcgcagcgtggctgcgctcgcttcc
cgaggcaacacgctgggtgtggcgcccaccggcgcgggcaagaccatcatgctctcggcg
gtcaccggcgagatgatcggcgacggcgccaaggcctgcgtgctggcccatcgtgatgaa
ctgaccgcgcagaaccgcgccaagtttcagcgcgtggtgtcgggcgtcgccacctcggtc
atcgacgccaccgagaagtcctggggcggccaggtcgccttcgccatggtgccgacgctg
gcgcgcgcctcgaacctcgccgacatgccacgcctcgacctgctggttgtcgacgaggcg
caccatgcggtggcagacagctatcgccggatcatcgaccgggtgcgcgaagccaatccc
gacgcccgcatcttcggggtcacggcgacgccgaaccggggcgacaagaagggcctgcgc
gaggttttcgacaatgtcgccgatcaggtccgtctgggcgaactgatcgcctcgggccac
ctggtaccgccccgcaccttcgtcatcgacgtgggcgtgcaggacgagttgcgctcggtc
cgcaagaccatgtcggatttcgacatggcggaggtggcgggcatcatggaccgcgcgccc
gtcaccgacgaggtgatccgccactggaaggagaaggcgggcgaccggcagaccgtcgtg
ttctgctccaccgtcgcgcatgccgagcatgtcaccgaggcgttcagggcggcgggtgtt
tccgccgcgctgatccatggcgatctggcggtcgagacccgcaaggcgatcctcgccgac
tacgcggcgggcgacatccgcgtcgtcgtcaacgtggcggtgctgaccgagggctgggac
cacccgcccacatcctgcgtcgtgctgctgcggcccagctcctacaagtccaccatgatc
cagatggtcgggcgcgggctgcgcaccgtcgatcccgaggaacaccccggcatcgtcaag
accgactgcatcgtgctggatttcgggacgtcgagcctgatccacggcacgctggaacag
gatgtcgatctcgacggcaagaccgagaccggcgaggcgccgaccaagacctgtccggcc
tgcgaggcagagatcccgctggccgccaccgaatgcccgctctgcggcgaggcatttccg
cgcgaggagctggatgcaggcgaaggtggggccgccgcgccgctctcgggcttcatgatg
accgagatcgaccttctgaagcggtccagcttcgcgtgggtcgacctctacggcatggac
gatgcgctgatggccacgggcttcgcagcctggggcggcatcttctggctggacggggtc
tggtacgccatcggcggggcgaagggcgaacgcccccacctgttgggcgtcggcgagcgc
accgtttgccttgcgcaggccgacgactggctgaacacgcacgagaccgacgagagcgcc
ttcaagacccgctcctggctgcgccagccgccgaccgagaagcagctccagtacctgccg
cccgagtgccgccatgacttcggcctgacacgctaccgcgcctcggcgctgatgaccttc
ggcttcaacaagcgcgccatccgccagctgatcgacagagcggccagccccgagcggagg
gcggcatga

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