KEGG   Paracoccus sp. Arc7-R13: EOJ32_13135
Entry
EOJ32_13135       CDS       T06050                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
parr  Paracoccus sp. Arc7-R13
Pathway
parr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:parr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EOJ32_13135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:parr03019]
    EOJ32_13135
Messenger RNA biogenesis [BR:parr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EOJ32_13135
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AZY94520
LinkDB
Position
complement(2641499..2643175)
AA seq 558 aa
MAERLIYLPLGGAGEIGMNAYVYGYGLPGKERLILVDLGVTFGDMEGSPGIDLIMPDLTW
LEKNRHRLEAIFVTHGHEDHIGAIAHLWKRLDVPIYARRFTGTLVRLKMEEHGLPTEVVN
ITEARPAVTNVGPFGVQFVPISHSIPESSALIIDTPAGRVVHTGDFKMDVTPVVGDAFDP
VGLSQIAAEGKGVKVLACDSTNIFSTHPGRSEAVLATPILEWVMAQPNMVVATTFASNIA
RLKTLADAARASGRKVCLLGRAMRRMVSVGFDSGILKDFPETIGPEEAAKLPRNKVLLLV
TGSQGERRAASAQLSRGRYLGLSLKEGDSFLFSSKTIPGNEKSVGRIMNALSEAGVEVWD
ADDGLYHVSGHANRPDIEAMHDLLRPKVVIPMHGEHLHLREHVMLARAKGMTAEIVTNGT
MLDLTGDRPKVCDQVETGRLYLDGNLLIGAMDGVVRDRIRMALNGHAMVSVIVDEDDNVL
PDAWVELMGLSERTRSGGELARQIEAELSEFLERADARTVRDDGKMDEAIRKITRQVAME
EIGKKPEVTVSISRLMAD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggctgaacgcctgatctatctgccgctcggcggagcgggcgaaattggcatgaacgcc
tatgtctatggatacggcctgcccggcaaggagcggctgatcctggtggacctgggcgtc
accttcggcgacatggagggcagcccggggatcgacctgatcatgcccgacctgacctgg
ctggagaagaaccgccaccggctggaggcgatcttcgtcacccacggccacgaggaccat
atcggcgccatcgcgcatctgtggaagcggctggacgtgccgatctatgcgcgccgcttc
accgggacgctggtgcgcctgaagatggaagagcacggcctgccgaccgaggtggtcaac
atcaccgaagcgcgccctgccgtgaccaatgtcggccccttcggcgtgcagttcgtgccg
atcagccattcgatcccggaaagcagcgcgctgatcatcgacacgcctgcgggtcgggtc
gtgcatacgggcgacttcaagatggacgtgaccccggtcgtgggcgacgccttcgacccg
gtcggcctgtcgcagatcgcggcagaaggtaagggcgtcaaggtcctggcctgcgacagc
acgaacatcttttcgacccatcccggccggtccgaggcggttctggcgaccccgatcctg
gaatgggtcatggcgcagccgaacatggtcgtggccaccaccttcgccagcaatatcgcg
cgtctgaagacgctggccgacgcggcgcgcgcctcggggcgcaaggtgtgcctgttgggc
cgcgcgatgcggcgcatggtcagcgtgggcttcgacagcggcatcctgaaggatttcccc
gagacgatcgggcccgaggaggccgccaagctgccccgcaacaaggtcctgctgctggtc
accggcagccagggggagcgtcgcgcggccagcgcgcagctgtcgcgcggccgctatctg
ggcctgtcgctgaaggagggggacagcttcctgttcagctccaagaccatcccgggcaac
gaaaagtcggtcggccgcatcatgaacgcgctgagcgaggccggagtcgaggtctgggac
gccgatgacgggctctaccacgtctcgggtcacgcgaaccggcccgacatcgaggcgatg
cacgacctgctgcggcccaaggtcgtgatccccatgcatggcgagcacctgcacctgcgc
gaacacgtgatgctggcccgtgccaagggcatgaccgccgagatcgtcaccaacggcacg
atgctggacctgacgggcgatcgccccaaggtctgcgatcaggtcgaaacggggcgtctt
tatctggacggcaacctgctgatcggcgcgatggacggggtcgtgcgcgaccgcatccgc
atggcgctgaacgggcacgcgatggtcagcgtgatcgtggacgaggacgacaatgtcctg
cccgatgcctgggtcgaactgatgggcctgtccgagcggacccgttcgggcggcgagctg
gcccgccagatcgaggccgagctgtccgagttcctagagcgtgccgatgcacgcaccgtg
cgcgacgacggcaagatggacgaggcgatccgcaagatcacccgccaggtggcgatggag
gagatcggcaagaagcccgaggtcaccgtcagcatcagccgcctgatggccgactga

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