Paracoccus sp. Arc7-R13: EOJ32_13135
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Entry
EOJ32_13135 CDS
T06050
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOJ32_13135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parr03019
]
EOJ32_13135
Messenger RNA biogenesis [BR:
parr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EOJ32_13135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AZY94520
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Position
complement(2641499..2643175)
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AA seq
558 aa
AA seq
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MAERLIYLPLGGAGEIGMNAYVYGYGLPGKERLILVDLGVTFGDMEGSPGIDLIMPDLTW
LEKNRHRLEAIFVTHGHEDHIGAIAHLWKRLDVPIYARRFTGTLVRLKMEEHGLPTEVVN
ITEARPAVTNVGPFGVQFVPISHSIPESSALIIDTPAGRVVHTGDFKMDVTPVVGDAFDP
VGLSQIAAEGKGVKVLACDSTNIFSTHPGRSEAVLATPILEWVMAQPNMVVATTFASNIA
RLKTLADAARASGRKVCLLGRAMRRMVSVGFDSGILKDFPETIGPEEAAKLPRNKVLLLV
TGSQGERRAASAQLSRGRYLGLSLKEGDSFLFSSKTIPGNEKSVGRIMNALSEAGVEVWD
ADDGLYHVSGHANRPDIEAMHDLLRPKVVIPMHGEHLHLREHVMLARAKGMTAEIVTNGT
MLDLTGDRPKVCDQVETGRLYLDGNLLIGAMDGVVRDRIRMALNGHAMVSVIVDEDDNVL
PDAWVELMGLSERTRSGGELARQIEAELSEFLERADARTVRDDGKMDEAIRKITRQVAME
EIGKKPEVTVSISRLMAD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgcctgatctatctgccgctcggcggagcgggcgaaattggcatgaacgcc
tatgtctatggatacggcctgcccggcaaggagcggctgatcctggtggacctgggcgtc
accttcggcgacatggagggcagcccggggatcgacctgatcatgcccgacctgacctgg
ctggagaagaaccgccaccggctggaggcgatcttcgtcacccacggccacgaggaccat
atcggcgccatcgcgcatctgtggaagcggctggacgtgccgatctatgcgcgccgcttc
accgggacgctggtgcgcctgaagatggaagagcacggcctgccgaccgaggtggtcaac
atcaccgaagcgcgccctgccgtgaccaatgtcggccccttcggcgtgcagttcgtgccg
atcagccattcgatcccggaaagcagcgcgctgatcatcgacacgcctgcgggtcgggtc
gtgcatacgggcgacttcaagatggacgtgaccccggtcgtgggcgacgccttcgacccg
gtcggcctgtcgcagatcgcggcagaaggtaagggcgtcaaggtcctggcctgcgacagc
acgaacatcttttcgacccatcccggccggtccgaggcggttctggcgaccccgatcctg
gaatgggtcatggcgcagccgaacatggtcgtggccaccaccttcgccagcaatatcgcg
cgtctgaagacgctggccgacgcggcgcgcgcctcggggcgcaaggtgtgcctgttgggc
cgcgcgatgcggcgcatggtcagcgtgggcttcgacagcggcatcctgaaggatttcccc
gagacgatcgggcccgaggaggccgccaagctgccccgcaacaaggtcctgctgctggtc
accggcagccagggggagcgtcgcgcggccagcgcgcagctgtcgcgcggccgctatctg
ggcctgtcgctgaaggagggggacagcttcctgttcagctccaagaccatcccgggcaac
gaaaagtcggtcggccgcatcatgaacgcgctgagcgaggccggagtcgaggtctgggac
gccgatgacgggctctaccacgtctcgggtcacgcgaaccggcccgacatcgaggcgatg
cacgacctgctgcggcccaaggtcgtgatccccatgcatggcgagcacctgcacctgcgc
gaacacgtgatgctggcccgtgccaagggcatgaccgccgagatcgtcaccaacggcacg
atgctggacctgacgggcgatcgccccaaggtctgcgatcaggtcgaaacggggcgtctt
tatctggacggcaacctgctgatcggcgcgatggacggggtcgtgcgcgaccgcatccgc
atggcgctgaacgggcacgcgatggtcagcgtgatcgtggacgaggacgacaatgtcctg
cccgatgcctgggtcgaactgatgggcctgtccgagcggacccgttcgggcggcgagctg
gcccgccagatcgaggccgagctgtccgagttcctagagcgtgccgatgcacgcaccgtg
cgcgacgacggcaagatggacgaggcgatccgcaagatcacccgccaggtggcgatggag
gagatcggcaagaagcccgaggtcaccgtcagcatcagccgcctgatggccgactga
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