Paracoccus sp. Arc7-R13: EOJ32_15135
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Entry
EOJ32_15135 CDS
T06050
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr03030
DNA replication
parr03430
Mismatch repair
parr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EOJ32_15135
03430 Mismatch repair
EOJ32_15135
03440 Homologous recombination
EOJ32_15135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parr03032
]
EOJ32_15135
03400 DNA repair and recombination proteins [BR:
parr03400
]
EOJ32_15135
Enzymes [BR:
parr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EOJ32_15135
DNA replication proteins [BR:
parr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EOJ32_15135
DNA repair and recombination proteins [BR:
parr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EOJ32_15135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AZY94876
LinkDB
All DBs
Position
complement(3044178..3047648)
Genome browser
AA seq
1156 aa
AA seq
DB search
MAAKSPRFIHLRTHSEHSLLEGAIPVGKLPSLAFEAGMPAVALTDTNNMFAALEFSVKAR
DKGIQPIIGCQVTLMAEATGPVVLLAQNQAGWMNLMALSTCLYLREGGALPHVTVDELCA
KAEGLICLTGGATGPLGLLIAQGQMPKAEALADRLAASFGDRLYVELQRHPGENGQLMAA
EAASEGGLVDLAYAKGLPLVATNDVYFPKTTMYEAHDALICIAEKAYVDQSQPRRRLTPQ
HYFKSAEEMAVLFADLPEAIENTVEIARRCAFAVSKHAPILPRFADDEVTELRRQAHAGL
AERLKVIPHAVTVEEYTARLDFELGIIEQMGFPGYFLIVADFIHWAKEQGIPVGPGRGSG
AGSLVAYALTITDLDPLRYNLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQGKYGAD
KVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSIAKARADEPRLRE
AAREEVVARLLDYAEQLEGLYRNASTHAAGVVIGDRPLDQLVPLYRDPASDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINGQGRPLHIAADGRQLYDPAPGTENQINLIPL
DDKASYDLFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRDLESIHPTIDDILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAA
EMAKERPKFVKGAVANGVPDKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAVYKRECDRMGIEIVPPCVNRSAPTFTVGPGRIHYALGALK
GVGLEAMRLIHDARADQPFRDIHDLARRTDMKRVGKRPLEMLARAGAFDGLDDNRARVMK
SLDGLVAWSAAVQSQAASSQTSLFGGGEDLPPPRAPLSGIWLPTEKLGEEHKAVGFYLSG
HPLDDYLPALRRKKVMTLAEISQDALNGPLVAQIAGTVAARMERKSAKGTAYAFVSLSDP
TGLYEVTVFSDLLTASRDKLEPGASVVLQVKVEPSGDQVKMLANSVTALEDAVADAGAGC
LAVEMQGADTIPRLVEVLTRIRTDIIVPPRSRGPIRLRIREGDEIIEIEVANDAPLTTPA
RQALRAVPGVLDVVEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaaatccccccgattcatccatcttcgcacacattccgagcattcgctgctg
gaaggtgccattcccgtaggcaaattgccaagccttgccttcgaggcgggcatgccggcg
gtcgcgctgaccgacacgaacaacatgttcgccgcgctggaattcagcgtgaaggcccgc
gacaagggcatccagcccattatcggctgtcaggtgacactgatggccgaggccaccggg
ccggtcgtccttctggcacagaaccaggcggggtggatgaacctgatggcgctgtccacc
tgcctctatctgcgcgagggcggggcgctgccgcatgtgacggtcgacgagctgtgcgcc
aaggccgaagggctgatctgcctgaccgggggcgcgacgggtcccttgggcctgctgatc
gcgcagggccagatgcccaaggccgaggcgctggccgaccggctggcggcgtccttcggc
gaccggctctatgtcgaactgcagcgccatcccggcgagaacggccagctgatggccgcc
gaggccgcgtccgagggcggtctggtcgatctggcctatgctaagggtctgccgctggtg
gcgacgaacgatgtctatttccccaagaccaccatgtacgaggcgcatgacgcgctgatc
tgcatcgccgagaaagcctatgtcgaccagtcccagccccgtcgccgcctgacgccccag
cattacttcaagtccgccgaagagatggcggtcctgttcgccgacctgcccgaggcgatc
gagaacaccgtcgagatcgcccgccgctgcgcctttgcggtgtccaagcacgcgccgatc
ctgcccaggttcgccgatgacgaggtgaccgaactgcgtcgccaggcccatgccggcctg
gccgagcggctgaaggtcattccccacgcggtcacggtcgaggaatacaccgcgcgcctg
gatttcgaactgggcatcatcgagcagatgggttttcccggctacttcctgatcgtggcc
gatttcatccactgggccaaggaacagggcatcccggtcggaccaggccgcgggtcgggc
gccgggtcgctggtcgcctatgcgctgaccatcaccgaccttgatccgctgcgctacaac
ctgctgttcgagcggttcctgaaccccgaacgggtcagcatgccggatttcgacatcgac
ttctgcatggaccgccgcgaggaggtgatccgttacgtgcagggcaagtacggggccgac
aaggtgggccagatcatcaccttcggcgcgcttctgtccaaggctgcggtgcgcgacgtg
ggccgcgtgctgcagctgcccttcggccaggtggaccgcctgtccaagatgatcccggtc
gagggcgtgaaacccgtcagcatcgccaaggcccgcgccgacgagccgcgcctgcgcgag
gccgcgcgcgaggaggtggtggcccgcctgctggattacgccgaacagctggaggggctt
tatcgcaacgcctcgacccacgcggcgggggtggtgatcggcgatcggccgctggaccag
ctggtgccgctctatcgcgatccggcgtccgacatgcccgcgacccagttcaacatgaaa
tgggtcgagcaggccggcctggtcaagttcgacttcctgggccttaagacgctgacggtg
atccagaatgcggtcgacctgatcaacgggcagggccgtccgctgcacatcgccgccgac
gggcggcagttgtacgaccccgcgccggggacggaaaaccagatcaacctgatcccgctg
gacgacaaggccagctatgatttgttcgccagcgcgcgcacggtcgcggtgttccaggtg
gaatccagcggcatgatggacgccctgcgccgcatgaaacccacctgcatcgaggacatc
gtggcgctggtggcgctgtaccgtcccggcccgatggagaacatcccgacctattgcgag
gtcaagaacggcctgcgcgacctagaatcgatccacccgaccatcgacgacatcctggcc
gagacccagggcatcatcgtctatcaggagcaggtgatgcagatcgcccaggtcatggcg
ggctattcgctgggcggcgccgacctgctgcgccgggcgatgggcaagaagatcgccgcg
gagatggccaaggagcggcccaagttcgtcaagggcgcggtcgccaacggcgtgcccgac
aagaaggccggagaggtcttcgacctgctggaaaagttcgccaactacggcttcaacaag
tcgcacgcggccgcctatgccgtggtcagctatcagaccgcgtggctgaaggcgaaccac
ccggtcgaattcatggccgcggtgatgaactgcgacatccacctgaccgacaagctggcc
gtctacaaacgcgaatgcgatcggatggggatcgagatcgtgccgccctgcgtcaaccgc
tcggcgccgaccttcaccgtggggccggggcgcatccactatgccctgggcgcgctgaag
ggcgtgggcctggaggcgatgcgcctgatccacgatgcgcgcgcggaccagccgttccgc
gacatccacgacctggcacggcgcaccgacatgaagcgggtgggcaagcgcccgctggag
atgctggcccgcgccggcgccttcgacggactggacgacaaccgcgcccgggtgatgaag
tccctggacgggttggtcgcctggtcggcggcggtccagagccaggccgcctccagccag
acgtcgctgttcgggggcggagaggatctgccgccgccgcgtgcccccctgtcgggcatc
tggctgccgaccgagaagctgggagaggagcacaaggccgtcggattctatctgtccggg
catccgctggacgactatctgccggccctgcgccgcaagaaggtgatgaccctggccgag
atcagccaggacgcgctgaacggcccgctggtcgcccagatcgcgggcacggtcgccgcg
cggatggagcgcaagtccgccaagggcactgcctatgccttcgtcagcctgtcggacccc
acgggcctgtatgaggtcacggtgttctcggacctgctgaccgcaagccgcgacaagctg
gaaccgggcgccagcgtcgtgctgcaggtcaaggtcgagccgtcgggcgatcaggtcaag
atgctggccaattcggtcaccgcgctggaggacgccgtggccgacgcgggtgcaggctgc
cttgcggtcgagatgcagggcgccgacacgatcccgcgcctggtcgaggtgctgacccgc
atccgcaccgacatcatcgtgccgccccggtcgcgcggcccgatccgcctgcgcatccga
gagggcgacgagatcatcgagatcgaggtcgccaacgacgcccccctgaccacccccgcg
cgccaggcgctgcgcgcggtgcccggcgtgctggacgtggtcgaggagtga
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