Paracoccus sp. Arc7-R13: EOJ32_15395
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Entry
EOJ32_15395 CDS
T06050
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EOJ32_15395 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parr03021
]
EOJ32_15395 (rpoB)
03400 DNA repair and recombination proteins [BR:
parr03400
]
EOJ32_15395 (rpoB)
Enzymes [BR:
parr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EOJ32_15395 (rpoB)
Transcription machinery [BR:
parr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EOJ32_15395 (rpoB)
DNA repair and recombination proteins [BR:
parr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EOJ32_15395 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AZY94924
LinkDB
All DBs
Position
complement(3107361..3111506)
Genome browser
AA seq
1381 aa
AA seq
DB search
MAQAYVGQKRIRRYYGNIREVLEMPNLIEVQKSSYDLFLNSGEGSGHNDGDGIQGVFQSV
FPIKDFNETATLEFVKYELEKPKYDVDECQQRDMTYAAPLKVTLRLIVFDVDENTGAKSV
KDIKEQDVFMGDMPLMTTNGTFIVNGTERVVVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYALGMDQEAIMDAFYETVTYSLRR
EGREQGWVTRFFPERVRGTRPAYDLVNADTGEVITKAGEKVTPRLVKKLLESEEQLNLFV
PFERIVGRFVAKDIVNDQTGFIYAEAGDEITAEYDKQGEMTGGLLKVLLDNDITDVPVLD
IDHVNVGPYIRNTMAADKNMGREGALMDIYRVMRPGEPPTVEAASNLFNSLFFDSERYDL
SAVGRVKMNMRLDLDAPDTQRTLRHEDIVSCISGLVELRDGKGEIDDIDHLGNRRVRSVG
ELMENQYRVGLLRMERAIRERMSGVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQ
TNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLAT
FARVNKYGFIETPYRKVVDGHVTDDVVYMSATEEMRHTVAQANATLDENGNFTDELISTR
QSGDFMLNPVDAVDLIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEA
PFVGTGMEATVARDSGAAIMARRGGIIDQVDAQRIVVRATEDMGAGDAGVDIYRLRKFKR
SNQSSTINQRPLVKVGEKVVANQVIADGPSTDQGELAIGRNVVVAFMPWNGYNYEDSILI
SERIHRDDVFTSIHIDEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAECG
PGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHG
VDKDERALQIEREEVERLARDRDDEQGILDRNIYARLKTLILGKTALKGPKGIKSGTEIT
EELLGTMSRGQWWQLAVSEEDIAKDVEALNGQYDTQKKLLEARFEDKVEKVRQGDDLPPG
VMKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPMEDMPFLADGTPVDLVLNPLGVPS
RMNVGQILETHMGWASRALGLKIDEALEEYRRNGDMTPVREAMRIGYGDELYSEMFDGLD
DETLREHAGTVRTGVPIATPVFDGAKEADVNDALTRAGFDTSGQSVVFDGRSGEQFARKV
TVGMKYVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAY
TLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDADEE
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcttatgtcggccaaaagcggatccgccgctattatggcaacatccgtgaa
gttctggagatgccgaacctgatcgaggttcagaaatcctcctatgacctgttcctgaac
tcgggcgagggcagcggtcataacgatggtgacggcatccagggcgtgttccagtcggtg
ttcccgatcaaggacttcaacgagacggccacgctggagttcgtcaagtacgagctggag
aagccgaaatacgacgtggacgagtgccagcagcgcgacatgacctatgccgcgccgctt
aaggtcaccctgcgtctgatcgtgttcgatgtcgacgagaacaccggggcgaaatccgtc
aaggacatcaaggagcaggacgtcttcatgggcgacatgcccctgatgacgacgaacggc
acgttcatcgtgaacggcaccgagcgcgtggtcgtcagccagatgcaccgcagcccgggc
gtgttcttcgaccatgaccgcggcaagacccattcctcgggcaagctgctgttcgcctgc
cgcatcattccctatcgcggctcgtggctggacttcgaatttgacgccaaggacctggtg
ttcgctcggatcgaccgccgccgcaagctgccggtgacgacgctgctctatgccctgggc
atggatcaggaggcgatcatggacgcgttctacgagaccgtgacctactccctgcgccgc
gaggggcgcgagcagggctgggtgacgcggttcttcccggagcgcgtgcgcggcacccgg
cctgcctatgacctggtgaacgccgataccggcgaggtcatcacgaaggccggcgagaag
gtcaccccgcgccttgtgaagaagctgctggaatccgaagagcagctgaacctgttcgtc
ccgttcgagcgcatcgtcggccgcttcgtcgccaaggacatcgtcaacgaccagaccggc
ttcatctatgccgaggccggcgacgagatcaccgcggaatacgacaagcagggcgagatg
accggcggcctgctgaaggtgctgctggacaacgacatcaccgacgtgccggttctggac
atcgaccacgtcaacgtgggtccctacatccgcaatacgatggcggccgacaagaacatg
ggccgcgaaggcgcgctgatggacatctatcgcgtcatgcgcccgggcgagccgcccacc
gtcgaggccgcgtcgaacctgttcaactcgctgttcttcgacagcgagcgttacgacctg
tccgccgtgggccgggtcaagatgaacatgcgccttgatctggacgcccctgacacgcag
cgcacgctgcgccacgaggacatcgtgtcctgcatcagcggcctggtcgaactgcgcgac
ggcaagggcgagatcgacgacatcgaccacctgggcaaccgccgggtgcgttcggtcggc
gagctgatggagaaccagtaccgtgtcggcctgctgcgcatggagcgtgccatccgcgag
cgcatgtccggcgtcgagatcgacaccgtcatgccgcaggacctgatcaacgcgaaaccc
gcagcggcggcggtgcgtgaattcttcggctccagccagctgtcgcagttcatggaccag
acgaacccgctgtccgaagtgacgcacaagcgtcgcctgtcggcccttgggccgggcggt
ctgacacgcgaacgcgcaggcttcgaggttcgcgacgtccacccgacccattacggccgg
atgtgcccgatcgagacgccggaaggccagaacattggcctgatcaacagccttgccacc
tttgcacgggtgaacaagtacggcttcatcgagacgccctatcgcaaggtggtcgacggt
cacgtgaccgacgacgtcgtctatatgtccgcgaccgaggagatgcgtcacaccgtggcg
caggccaacgcgaccctggacgagaacggcaacttcaccgacgagctgatctcgacccgc
cagtcgggcgacttcatgctgaacccggtagatgcggtcgacctgatcgacgtgtcgccc
aagcaactggtttcggtcgcggccgcgctcatcccgttccttgagaatgacgacgccaac
cgcgcgctgatgggctcgaacatgcagcgtcaggccgtgcctctgctgcgtgccgaggcg
ccgttcgtgggcaccggcatggaagccaccgtggcgcgcgattcgggcgccgcgatcatg
gcgcgccgcggcggcatcatcgaccaggtcgatgcgcagcggatcgtggtccgggcgacc
gaggacatgggcgcgggcgacgcgggcgtggacatctatcgtctgcgcaagttcaagcgt
tcgaaccagtcctcgaccatcaaccagcgcccgctggtgaaggtcggagagaaagtcgtg
gccaaccaggtcatcgcggacggtccctcgaccgaccagggcgaactggcgatcggccgg
aacgtggtcgtcgccttcatgccgtggaacggctacaactacgaggactcgatcctgatc
tccgagcggatccaccgcgatgatgtgttcacctcgatccatatcgatgaatacgaggtt
gcggcccgcgacaccaagctggggccggaagagatcacccgtgacatcccgaacgtgggc
gaagaagccctgcgcaacctggatgaagccggcatcgtctatatcggcgccgaatgcggt
ccgggtgacatcctggtgggcaagatcacccccaagggcgaaagcccgatgacgccggaa
gaaaagctgctgcgtgccatcttcggtgagaaggcgtccgacgtccgcgacacctcgctg
cgtctgccgccgggtgcctatggcacgatcgtcgaggtccgggtgttcaaccgccacggc
gtcgacaaggacgagcgtgccctgcagatcgagcgcgaggaagtcgagcgtctggcgcgc
gaccgcgacgacgaacagggcatcctggaccgcaacatctatgcgcgtctgaagaccctg
atcctgggcaagaccgccctgaaggggccgaaaggcatcaagtcggggacggagatcacc
gaggagctgctgggcaccatgtcccgcggccagtggtggcagctggccgtcagcgaagag
gacatcgccaaggatgtcgaggcgctgaacggtcagtacgacacccagaagaagctgctg
gaggcccgcttcgaggacaaggtcgagaaggtccgtcagggcgacgacctgccgccgggc
gtgatgaagatggtcaaggtgttcgtcgccgtgaagcgcaagcttcaggcgggggacaag
atggccggtcgtcacggcaacaagggcgtcgtgtccaaggtcgtcccgatggaggacatg
ccgttcctggcggacggcactcccgtcgacctggttctgaaccccctgggcgtgccgtcg
cgcatgaacgtgggtcagatcctggagacccacatgggttgggccagccgcgccctgggc
ctcaagatcgacgaggcgctggaagagtatcgccgcaacggcgacatgactccggtccgc
gaggcgatgcgcatcggttacggcgacgagctgtattccgagatgttcgacggcctggac
gacgagaccctgcgcgagcatgcgggcaccgtccgcacgggcgtgccgatcgcgacgccg
gtcttcgacggcgccaaggaggccgacgtcaacgacgcgctgacccgtgccgggttcgac
acgtcgggccagtcggtggtgttcgatggccgttcgggcgaacagttcgcccgcaaggtc
accgtgggcatgaagtacgtcctgaagctgcaccacctggtcgacgacaagatgcacgcg
cgttccacgggtccgtactcgctggtcacgcagcagcccctgggcggcaaggcccagttc
ggcggccagcgtcttggcgagatggaggtctgggccctggaagcctatggcgcggcctac
acgctgcaggaaatgctgacggtcaagtcggacgacgtcgccggccgcacgaaggtctat
gagtccatcgtcaagggcgaggacaacttcgaggcgggcgtgccggaatcgttcaacgtg
ctggtcaaggaggtccggggtctgggcctcaacatggaactcctggatgcggacgaggag
gagtga
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