KEGG   Paracoccus suum: DRW48_15370
Entry
DRW48_15370       CDS       T05723                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pars  Paracoccus suum
Pathway
pars03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pars00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DRW48_15370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pars03019]
    DRW48_15370
Messenger RNA biogenesis [BR:pars03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DRW48_15370
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AXC50873
UniProt: A0A344PNB8
LinkDB
Position
complement(3161950..3163626)
AA seq 558 aa
MADRLIYLPLGGAGEIGMNAYVYGYGQPGRERLILVDLGVTFGDMDSSPGIDLIMPDLRW
LEANRDRLEAVFITHGHEDHVGALGLMWNRLKVPVYCRKFTGALARLKMEEHGQPLDQLK
IVTARPAVIEAGPFRVQFVPVSHSIPESAALVIDSPAGRIVHSGDFKLDGTPIVGEAFDP
ILWHDIAREGRGIKVLTCDSTNVFSPNPGRSEAVLANPLLDFVMAQKQMVVATTFASNVA
RLKTLADAGVAAGRQVCLLGRAMRRMITAAVETGILTNFPNTISPEQAANLPRGQVMLIV
TGSQGERRAASAQLARGRYLGLELKEGDSFLFSSRTIPGNERPVIRIMNGLSEKGVNLFD
AEDGTFHVSGHANRPDLEAVHDLLKPQILIPMHGEHMHLREHMMLGRAKGIQSMVVTNGT
MVDLTGDAPRVVDQVDTGRVYLDGTVLIGAMDGVVRDRIRMALNGHAMVNVIIDEDERPL
PDAWVETMGLPAQGRTRAPLDQQIEAELAEFLERADPRTIADDAKLEEAIRKITRQVTME
EIGKKPEVTVVISRLAAE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggctgaccgcctcatttatctgccgctcggcggcgccggcgagatcggcatgaacgcc
tatgtctacggctatggccagccagggcgcgaacggctgatcctggtcgatctgggggta
accttcggcgacatggacagctcgcccgggatcgacctcatcatgccggacctgcgctgg
ctggaggcgaaccgcgaccggctggaggccgtgttcatcacccacggccacgaggatcat
gtcggcgcgctgggcctgatgtggaaccgcctcaaggtgccggtctattgccgcaagttc
accggggccctggcccgcttgaagatggaggaacatggccagccgctggaccagctcaag
atcgtcacggcgcgcccggcggtgatcgaggcagggccgttccgggtccaattcgtgccc
gtcagccactcgatcccggaaagcgccgcgctggtcatcgacagcccggccggccggatc
gtccattcgggcgacttcaagctggacgggaccccgatcgtcggcgaggccttcgatccg
atcctgtggcacgacatcgcgcgcgagggacggggcatcaaggttctgacctgcgattcg
accaacgtcttctcgcccaatccgggccggtccgaggcagttctggcgaacccgctgctg
gatttcgtgatggcgcaaaaacagatggtggtcgcgaccacctttgccagcaacgtcgcc
cgcctgaaaaccttggccgatgccggtgtcgccgcggggcggcaggtctgcctgctgggc
cgggcgatgcgccgcatgatcacggcggcggtcgagaccgggattctgaccaacttcccc
aacaccatctcgcccgagcaggcggcgaacctgccgcgaggccaggtgatgctgatcgtc
accggcagtcagggcgagcggcgcgccgcctccgcgcaactggcgcgcggccgttatctg
gggcttgaactgaaggaaggcgacagcttcctcttcagcagccgcacgattcccgggaac
gagcgcccggtcatccgcatcatgaacgggctgtcggaaaaaggcgtgaacctgtttgat
gccgaggacggtaccttccatgtctcgggccacgccaaccggcccgacctcgaggcggtg
catgacctgctgaagccgcagatcctgattcccatgcatggcgagcacatgcatctgcgc
gagcacatgatgctgggccgcgccaagggcatacagtcgatggtcgtgaccaacggcacc
atggtcgacctgaccggcgacgcgccgagagttgtggatcaggtagataccgggcgcgtt
tatctggacggaacggtgctgatcggcgcgatggacggcgtggtgcgcgaccgcatccgc
atggcactgaacggtcatgcgatggtcaacgtcatcattgacgaggacgagcgcccgctg
cccgacgcctgggtcgagaccatgggcctgccggcgcagggccgcacccgcgcgccgctg
gaccagcagatcgaggccgaactggccgagttcctcgagcgcgccgacccgcgcaccatc
gccgacgacgcgaaactggaagaggcgattcgcaagatcacccgccaggtgaccatggaa
gagatcggcaagaagcccgaggtcacggtcgtcatctctcgcctcgccgccgaatag

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