Pseudoalteromonas arctica: PARC_a0024
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Entry
PARC_a0024 CDS
T05179
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine967-C5)-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
part03009
]
PARC_a0024 (rsmB)
Enzymes [BR:
part01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
PARC_a0024 (rsmB)
Ribosome biogenesis [BR:
part03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PARC_a0024 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_11
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ATC84812
LinkDB
All DBs
Position
I:complement(24888..26183)
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AA seq
431 aa
AA seq
DB search
MSNVPNVRALAAETLYNVVDKGASLNQELPFASQGLPPKDKALLQQICYGVLRYLPSLEN
YCQHLVEQPLKGKRRIFQFLLYVGIYQLQHMRVPPHAAISETVNALAQLRALGLKGLINA
ILRSFQRQQAELEEKAKLIPVCLYNHPNWFIKQVQTAYPDSWEALLEENQQQAPMWLRVN
QAQFSTQEYSEMLSANDIEHTLNPDFIDGIKLAKPRDVFSLPEFDTGACSVQDAAAQLAA
RFLEPKADDYILDACAAPGGKTCHILELADADVLALDSDSTRLERVKQNLTRIGLGADLQ
CGDASQPHTWWDEKLFDRILLDVPCSATGVIRRHPDIKWLRRASDIEDLSKLQNDILDSI
WPLLKPGGTLVYATCSVLPQENQQQVAKFLANNDDVEHIPLHENDTVTTPGLQLLPGESD
GFYYAKLVKKA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgttccaaacgtacgagcgctggccgctgaaactttatataacgtagttgat
aaaggcgcatcgcttaatcaagaacttccatttgcaagccaaggcttgccgcctaaagat
aaagcgttgctacagcaaatttgttatggcgttttacgctacttaccgagccttgaaaat
tactgccaacacttagtagagcagccattaaaaggtaaacgtagaatatttcagttttta
ttatatgtaggtatttatcaactgcagcatatgcgcgtaccaccacatgctgcaatttca
gaaactgtaaacgcactggctcaactgcgcgctttaggattaaaagggctgataaacgcc
attttacgtagttttcagcgccaacaagcagagcttgaagaaaaagcgaagcttattccg
gtatgtttatacaaccatccaaattggtttattaaacaggtgcaaacagcctacccagat
agctgggaagcactacttgaagaaaaccagcaacaagcgccaatgtggcttcgtgtaaat
caagcacaatttagcacgcaagagtacagcgaaatgcttagcgctaacgatattgaacac
accttaaaccctgactttattgatgggattaagcttgccaaaccacgtgatgtattttcg
ttgcctgagtttgatacaggtgcatgttcagtacaagatgctgcagcacagttggcagcc
cgctttttagaacctaaagcagatgactatattttagatgcctgtgcagcacctggcgga
aaaacgtgtcatatattagagcttgctgatgctgatgtacttgcacttgatagcgactca
actcgccttgaacgcgttaagcaaaacttaactcgtattggcttaggtgcagacctacaa
tgtggcgatgcctcacaaccacatacttggtgggacgaaaaattatttgatcgtattttg
cttgatgtgccttgttcagccactggtgtaattcgccgtcaccctgatataaaatggtta
cgtcgcgcatcagatatcgaagacttatctaagttacaaaacgatattcttgatagcatt
tggccactgttaaaaccaggtggcacattggtatatgctacgtgttcggttcttccacaa
gaaaaccaacagcaagttgctaagtttttagctaataacgatgatgtagaacatatacct
ctacacgaaaatgataccgtaacaactccaggtttgcagttactgcccggtgaaagtgat
ggattttattacgctaagctagttaaaaaagcctaa
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