Pseudoalteromonas arctica: PARC_a0031
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Entry
PARC_a0031 CDS
T05179
Symbol
yrdD
Name
(GenBank) putative DNA topoisomerase
KO
K07479
putative DNA topoisomerase
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PARC_a0031 (yrdD)
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Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
CoiA_N
Zn_ribbon_LysW
Zn_Ribbon_TF
DZR
DNA_ligase_ZBD
Zn_ribbon_PaaD
DUF5983
Toprim_C_rpt
zf-Vps39_C
Zn_ribbon_recom
Zn_ribbon_PADR1
Ogr_Delta
Zn_ribbon_FGT1_2
Zn_Ribbon_1
DUF3797
ADK_lid
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
ATC84818
UniProt:
A0A290RVZ9
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Position
I:30607..31182
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AA seq
191 aa
AA seq
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MSKIDHSLFSANKHALEKEYEICPQCGSELVIRNSKSGPFLGCASYPKCDFIRPLAHHDS
NEIKVLEDSACPQCSKPLVVKNGRYGMFIGCTGYPECHYIANENEEKQSEDTLPSCPKCK
KGHLVARSNKFGKVFYSCDCYPSCKYTLNNKPVEHPCPECNWPIVIERNMANGTLLQCPQ
KSCMHKLTPTE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatcgaccattcgcttttctcggcgaacaagcacgccctcgaaaaagaatac
gagatatgcccacagtgtggttcagagttagtgatccgcaatagtaaatcaggccctttt
ttaggatgcgcaagttatcccaaatgcgattttattaggccgttggcacatcacgatagt
aacgaaattaaagttcttgaagattcagcatgcccgcagtgcagcaaaccgctggtggtt
aaaaatgggcgctacggtatgtttattgggtgtacgggatatccagagtgccattacatt
gctaacgaaaatgaagaaaaacaaagcgaagacactttgccaagttgccctaaatgcaaa
aaaggtcatttagtcgcgcgcagtaataaatttggtaaagtattttattcttgtgattgc
tatccaagttgtaaatacacacttaataataaaccggttgaacacccgtgtcctgaatgt
aactggcctatcgtcatagagagaaatatggcaaacggcacattattgcaatgcccacaa
aaaagctgcatgcataagctcaccccaactgaataa
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