Pseudoalteromonas arctica: PARC_a0131
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Entry
PARC_a0131 CDS
T05179
Symbol
birA
Name
(GenBank) BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
part
Pseudoalteromonas arctica
Pathway
part00780
Biotin metabolism
part01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
part00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
PARC_a0131 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
part03000
]
PARC_a0131 (birA)
Enzymes [BR:
part01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
PARC_a0131 (birA)
Transcription factors [BR:
part03000
]
Prokaryotic type
Helix-turn-helix
Other families
PARC_a0131 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_LplA_LipB_2
HTH_24
BPL_C
MarR_2
HTH_5
Fe_dep_repress
HTH_20
MarR
HTH_AsnC-type
HTH_IclR
HTH_Crp_2
HTH_DeoR
HTH_1
Mga
HTH_28
HTH_10
TrkA_TMD
DUF7343
HTH_34
HTH_36
NirdL-like_HTH
RepL
Motif
Other DBs
NCBI-ProteinID:
ATC84905
UniProt:
A0A290RYU1
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All DBs
Position
I:127953..128945
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AA seq
330 aa
AA seq
DB search
MKAPDGNKLAILNALNQGGFVSGQALGEKLGISRAAVSKHIKTLQEMGLDIFKVTGKGYC
LNSQVGLLNKTQIDQHYKALGANTADVEVHPIIDSTNSELMRRIQAKTALESGTVIVAEM
QQAGRGRRGRVWQSPFGANLYYSYFWRLDDGLQAAMGVSIAVGLAVYDAIKALYQIDVEL
KWPNDIYINKQKLAGVLVELDGQPQGPCQLVIGIGINLQMPESFSQHIDQAWTDLNQHTQ
KLDKNQLVASLTYHLEQRLVQYRQTGLQDMYEQWNSLNAFAGDYVELNTGHRSWRGICEG
IDPQGGIRIRQDGEVKSYYGGEVSLRKAQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacctgatggaaacaaactcgctattttaaatgcacttaaccaagggggcttt
gtatctggccaagccttgggtgaaaagctaggaattagccgagctgcggtgagtaaacat
atcaaaacgttacaagaaatgggcttggatatttttaaagtgactggcaaaggctactgt
ttgaatagtcaggtgggccttttaaataaaacacaaattgatcagcactacaaagcgcta
ggtgctaatactgccgatgtagaagtacaccctattattgattcgaccaacagcgagctt
atgcgccgtatacaggctaaaacagcgcttgagtctggcactgttattgttgctgaaatg
cagcaagcagggcgtggccgacgcggccgtgtttggcaatccccatttggcgctaatttg
tattacagttacttttggcgtttagatgacgggcttcaagctgcaatgggtgtatcaatt
gcggtaggccttgctgtttatgatgcaattaaagcgttataccaaattgacgtagagctt
aaatggcctaacgatatttatataaataaacaaaaacttgcaggtgtattggttgaatta
gatgggcaaccgcaaggaccttgtcagttagtgattggtataggtattaatttacaaatg
cctgagagttttagccaacatatagaccaagcgtggaccgacttaaatcaacatactcaa
aagcttgataaaaaccagctggtggcgtcacttacttatcatttagagcagcgtttagtg
cagtatcgtcaaactggcttacaagatatgtatgagcaatggaattcgcttaatgcgttt
gctggcgattatgttgagctaaatacaggacaccgaagctggcgtggaatatgcgaaggt
attgacccacaaggtggaatacgaattcgccaagatggtgaagtaaaaagttattacggt
ggggaagtctccctcagaaaggcgcaagtatga
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