Pseudoalteromonas arctica: PARC_a0441
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Entry
PARC_a0441 CDS
T05179
Name
(GenBank) hypothetical protein
KO
K18765
RNase E specificity factor CsrD
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
part03019
]
PARC_a0441
Messenger RNA biogenesis [BR:
part03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PARC_a0441
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
DUF4408
Motif
Other DBs
NCBI-ProteinID:
ATC85179
UniProt:
A0A290RZ72
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All DBs
Position
I:451132..452856
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AA seq
574 aa
AA seq
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MNNTLVNNLTSEYAMQQSKLWFLKQFKGIYFTFIACVLLSFNFLLNDALHQKIHASGQQL
VKQVHELNLAPLINNEVLLALAKSEGFMLEAQPSSSHFMHLVSVEREVFSYKTLSLSLYH
YPAWVMQSYLFLLLNLIIIGTAGWSFRWWSLLKISRETINTPTVSTKKAKQKQQKTMFIK
QVKNCELSSLYGVNPATHHLFLLVSCSCNFDQNIDIQASFNVLVAKTFSELRGRSVNVVD
SNYLAITLRGVPVTELDCYVARLHKCVFVLCQNNQKGITRKNIKIGACDYKLGADEIMVN
QFARSALTLSQSSLLQHCHRLPLHHSQERALSSEQVIENIEKNKFILFFQPLFELSSGDI
LQHEVLIRVRHSKHGLLAARYFINQIYSDQDTLILDKAVINQVKRLIQSESSALTVSVNL
HPNSWFNDEFWHWLSGQLTQLKFNAKLQFEIREEDFFTQRKKITNALNIIKKNRSQVIID
NVQNSEKITALINHNEVCALKLSYELVRLVHEKNHNQIQIKKIVEAAKLLNLPVYAVGVE
TQKELFMLEKLGIVGAQGFYFSEPLQEFTKTVFH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaacactttagttaataatttaacgagtgagtacgccatgcaacaaagcaaactc
tggtttttaaagcaattcaaagggatttatttcacttttatagcgtgtgtacttctgagt
tttaattttttattaaacgatgcattacatcaaaagatacatgcgtcagggcagcaattg
gtcaaacaagtacatgaattaaatttagcacctttgataaataacgaggtgttgctcgcg
ttggctaaaagtgaagggtttatgcttgaagcgcagccttcctcttcacactttatgcat
ttagtgagtgttgagcgcgaagtatttagctataaaacactcagtttgagcttgtatcat
tatccggcctgggtgatgcaaagttacttatttttattgctaaacttaattattataggg
actgcaggttggtcttttcgctggtggagcttacttaaaataagtcgagaaactataaac
acaccaactgtctccaccaaaaaggctaaacaaaagcagcaaaaaacaatgtttattaag
caagtgaaaaactgcgaactgagctctttatatggagtgaacccagcaacccatcactta
tttttacttgttagctgcagttgtaactttgatcaaaatatagatatacaagcgagcttt
aacgtattagtggctaaaacattttctgaacttagagggcgatcggtaaacgtcgttgac
tctaattacctagcgattactttgcgaggcgtccctgttactgaattagattgctacgtt
gcacgattacataagtgtgtatttgtattatgtcaaaataatcaaaaaggtattactcgt
aaaaatattaaaataggcgcatgcgattataaattaggtgcagacgaaataatggtaaat
caatttgcaaggtcagcacttacattgtcgcaaagtagtttactgcagcattgccatcgt
ttaccactgcatcatagtcaagaaagagcgctatctagtgaacaagtaatcgaaaatatt
gaaaagaataaattcatattgttttttcagccattatttgaactctcaagtggtgatatt
ttacagcacgaagtcctaattagagttcgccacagcaaacatggtttgcttgccgctcga
tattttattaatcaaatttatagtgatcaagataccttaatattagataaggcagtgata
aaccaagttaaaagattaatacaaagtgagtcatcggctttaaccgtaagtgtaaatttg
catcccaatagctggtttaatgatgaattttggcattggttgtccggccaactgacacaa
ttaaaattcaacgccaagttacaatttgagatacgtgaagaagatttttttacacaaaga
aaaaaaataacgaatgcattaaatataatcaaaaaaaatcgctctcaagtaattatcgat
aatgtacaaaatagtgagaaaattacggctttgatcaatcacaatgaagtatgcgctctt
aaactatcgtatgaacttgttcgcttagtccatgagaaaaatcacaatcaaatacaaatt
aaaaagatagtagaggcagctaaactactaaatttaccagtttatgctgttggcgtagaa
acacaaaaagagctatttatgctcgaaaaactagggatagtgggcgcgcaagggttttat
ttttcagagcctttgcaagaatttactaaaacagtatttcattag
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