Pseudoalteromonas arctica: PARC_a0783
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Entry
PARC_a0783 CDS
T05179
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03420
Nucleotide excision repair
part03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PARC_a0783
03430 Mismatch repair
PARC_a0783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a0783
Enzymes [BR:
part01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PARC_a0783
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PARC_a0783
MMR (mismatch excision repair)
Other MMR factors
PARC_a0783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Nipped-B_C
Motif
Other DBs
NCBI-ProteinID:
ATC85484
UniProt:
A0A290RZJ0
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All DBs
Position
I:775440..776645
Genome browser
AA seq
401 aa
AA seq
DB search
MHHEDVLFFTHFIFEKEPRVIELISNKFPYLFLDEFQDTNPLQTWIIKKISDQATVIGVI
GDPAQSIFKFAGANRKDFIDFTLPKIVNFKKSQNYRSSKKIIDFLKQLRSDIEQIPEKDT
IDGEQVVMLVGKENNAIKYINNLGENDFSVLCRWNKDVNDINNKFKTTKRENLIDLLYIE
DSDKKRPRFIHSLIKAYDLNKSGEYKESILELKKHLIGINLYGIEKRKILIEMLNYIKDN
HESPIVDIYNYLQCFLKKHSVSFTGLRKTKGDYKEIHKTKFIDLIPFLAKESKFKNKIKT
IHQAKGDEYNFVLLCLFDKTDKNGKTTKKIETILKNYIFDSKKNITLDSEVGEETRLIYV
ACSRAKKKLFINVPTLSESDQLKVENLGVFVDRESAGLCTL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatgaagatgttttattttttacacactttatttttgagaaagaaccgagagtt
attgagttaataagtaacaaatttccttatctttttttagatgagtttcaagatactaat
ccattacagacatggattataaagaaaatatctgatcaagctacggtaataggagttatt
ggtgaccctgcacaatcaatctttaaatttgcaggagcaaaccgtaaagattttattgat
tttaccttacctaaaattgttaatttcaaaaaatcacaaaattatagaagctcaaaaaaa
attattgattttttaaagcaactaagaagtgacattgaacaaattcctgaaaaagacact
atagatggggaacaagttgtaatgttggtaggtaaagaaaataatgcgataaaatatata
aataacttaggagaaaatgatttttcagtattatgtcggtggaacaaagatgtgaacgac
ataaataataaatttaaaacgactaagcgtgaaaatttaattgacctcctttatatagaa
gatagtgataaaaaaagaccccgatttatacattcattaattaaagcatatgatttaaac
aagagtggtgagtataaagagtcaattctagaattgaaaaaacatttgattggaataaat
ttatacggtattgagaaacgtaagatactaattgaaatgctaaattatataaaagataac
catgaatcccccattgttgatatttataattatttgcaatgttttctaaaaaaacactct
gtttctttcactgggttaagaaaaacaaaaggggattacaaagaaattcataagactaaa
tttattgatctaattccttttcttgctaaggaatcaaaatttaaaaataaaataaagaca
attcatcaagcaaagggagatgagtataattttgttttgttatgtttgtttgataaaacg
gataaaaatggaaaaacaacaaaaaaaatagaaaccattttaaaaaattatatatttgat
tctaaaaaaaatattactcttgattctgaagtaggagaagaaactaggcttatttatgtt
gcttgtagtagagccaaaaaaaagctttttattaatgtgccaactttatcagaaagtgat
caattgaaagtagaaaatctaggtgtatttgttgatagggaatcagcggggttatgtact
ctataa
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