Pseudoalteromonas arctica: PARC_a0918
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Entry
PARC_a0918 CDS
T05179
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PARC_a0918 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a0918 (xseA)
Enzymes [BR:
part01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PARC_a0918 (xseA)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PARC_a0918 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF7553
Baculo_PEP_C
DUF1822
Motif
Other DBs
NCBI-ProteinID:
ATC85599
UniProt:
A0A290S0X5
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All DBs
Position
I:complement(891042..892382)
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AA seq
446 aa
AA seq
DB search
MFSKPSQAVYTVSRLNREIRTILEQGFASLVLTGEISNFITPASGHWYFSLKDDKAQIKA
AMWRGNNRNQSYRPVNGVQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQKFDALKMR
LAAEGLFSSAHKQPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKE
AHVHLINQIELANARDEVDVLILGRGGGSLEDLWCFNHEQLARAIFKSELPIVSAVGHEI
DTTISDYVADVRAATPSAAAELVSPNTQELHNKVTQLVNRLSNAFKHGIADKRALATQLQ
HRLNLCHPRNQLNQKSQRLDELSIALQQAMRHRLYQQERTLNNLTPRLMRQSPDKKLATA
SHQLSQLQARLNQAIQHQLQQANNSLALQASRLDSVSPLNVLARGYSITKTQQGKVVKSV
GQIKTGDVLITELVDGSIESQVIPIT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaagccttcgcaggcggtttacaccgtttcacgccttaatagagaaattcgc
acaatccttgagcaaggttttgcatctttagtgctcacgggcgaaatttctaactttatt
acccctgcatctggacattggtacttttcgttaaaagacgataaagcacaaattaaagcc
gcaatgtggcgaggcaataatcgcaaccaaagctaccgccctgtaaatggcgtacaagtt
acagtaaaagcgcgtgtatcgctttatgaacctcgcggtgactaccagcttattgttgag
catatggaacccgcaggcgaaggtcagctaaaacaaaaatttgatgcgcttaaaatgcgt
ttagccgccgaaggattatttagctctgctcacaaacagccattaccccaaaatattaat
cgcattggtgttattacttcagcaaccggcgctgctataaaagatattttaacggtactt
aaacgtcgtgcaccgcagctagaagtcatcatttaccctgctatggtacaaggcaaagaa
gcgcacgtgcatttaattaaccaaattgaattagctaatgctcgtgatgaagtagacgta
cttattttagggcgaggcggcggatcacttgaagatttatggtgttttaatcacgaacag
ctcgcccgcgctattttcaaaagtgaattacccatagtaagtgcggtaggccacgaaata
gataccactattagcgattacgttgctgatgttcgtgcagcgaccccatcagccgcagct
gagcttgtaagcccaaatacgcaagagttacacaacaaagtaacgcaattagttaatcgt
ttatctaacgcgtttaagcacggcattgccgacaagcgcgcactagcaacgcagttacaa
caccgccttaatttatgtcatccgcgtaatcagcttaatcaaaaatcacaacgtttggat
gagctaagcattgcgctgcaacaggcgatgcgtcatcgtttataccaacaagaacgtaca
ctcaataacttaacgccgcgtttaatgcgccaatcacccgataaaaaactcgctacagca
agccatcaactttcgcaattacaagctaggctaaaccaagctatacagcatcagttacag
caagcgaataatagcttagcactgcaagcaagcaggttagattcagtaagtccgcttaat
gttttagcgcgcggctatagcatcactaaaacacaacaaggcaaagtggttaaatctgtg
gggcaaattaaaacaggcgatgttttgattacagagctcgttgacggctctatagaatca
caggttatacctattacataa
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