Pseudoalteromonas arctica: PARC_a1005
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Entry
PARC_a1005 CDS
T05179
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
part03009
]
PARC_a1005 (rumA)
Enzymes [BR:
part01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PARC_a1005 (rumA)
Ribosome biogenesis [BR:
part03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PARC_a1005 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_11
PrmA
Methyltransf_23
PCMT
Methyltransf_4
DOT1
RrnaAD
N6_N4_Mtase
mCpol
Motif
Other DBs
NCBI-ProteinID:
ATC85677
LinkDB
All DBs
Position
I:973548..974873
Genome browser
AA seq
441 aa
AA seq
DB search
MAQIFKAKKKPLKQQTLELNITGMDHQGRGIAKHHNKVCFVSGALPNETVKAMLVEDKAK
YSSAKVIKVIKASESRVDAFCEHYNQCGGCQLQHLEVSQQVVEKQTAVTQLFSKFAKLNS
LNWQAPLLSKSVHYRRSARIAVMFDKAAKKMRVGYRASGSKNIVSINKCAVLDEVFADVF
TLFDGLINQHKALHSISHLQLCQSDEENFVVIRHTKAINDDTKALVEHITKSQQFEIVWQ
SESDVIEHSHLAMPFYYLKEFDLKFEFGLGNFIQVNAQVNEAMLKQAANWLDLKGDENLL
DLFCGIGNFSLVLAKQAKSVIGVEGVTSAVAMAAQNAQTNSITNAQFHCFDLTQSIQSAP
WFSKNLDVLVLDPSRTGAMAVLEQLSLKQFKTILYVSCDPVTLARDSAIISQAGFDLNKI
GLMNMFPHTGHIETMALFQRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatttttaaagcgaaaaaaaaaccgcttaagcaacaaacattagaattaaat
ataacgggaatggatcatcaagggcgtggcattgctaagcatcataataaagtatgcttt
gtaagcggtgcattaccaaatgaaacagttaaagcaatgctcgtcgaagataaagctaaa
tacagcagtgcaaaagtaattaaagttattaaagcgagtgaatcaagagtagacgctttt
tgtgagcactataatcagtgtggtggctgccaattacagcatttagaagtaagccaacaa
gttgtagaaaaacaaactgcagttactcagctatttagtaagtttgctaaattaaacagc
ttaaactggcaagctccattattaagtaagtctgtgcattacaggcgcagcgctcgcata
gccgttatgtttgataaagcagcaaaaaaaatgcgtgtgggttacagagccagtggttca
aaaaatattgtcagtattaataaatgtgcagtacttgatgaagtatttgcagatgttttt
acactttttgatggtttaattaatcaacacaaagcgctgcacagtataagccatttacag
ttatgccaaagtgatgaggaaaactttgttgttattcgtcacactaaagcaattaacgat
gatacaaaggctttggttgagcacataacaaaaagccaacagtttgaaattgtatggcaa
agcgagagcgatgtaattgagcattcacacttagccatgccgttttattatcttaaagag
tttgatctaaaatttgaatttggtttaggtaattttattcaggtaaatgcgcaagttaac
gaagctatgttaaagcaagccgcaaattggcttgatttaaaaggtgatgaaaatttattg
gatttattttgtggcattggtaatttctcattagtgttggcaaaacaagcaaaatctgta
attggcgtagaaggtgtgacttcagcggttgcaatggctgctcaaaatgcgcaaactaac
tctattaccaatgcgcagtttcattgctttgatttaacgcaaagcatacagagcgcccca
tggtttagtaaaaacttagatgtgcttgtactcgatccttctaggactggtgcaatggct
gtattagagcaattatctttaaagcagtttaaaactattttatatgtctcttgtgaccct
gttactttagcccgtgacagcgcaattatttcacaagctggctttgatcttaataaaatt
gggctaatgaatatgttccctcatacagggcatattgaaactatggcgttatttcaacgg
aggtag
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