Pseudoalteromonas arctica: PARC_a1037
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Entry
PARC_a1037 CDS
T05179
Symbol
lapB
Name
(GenBank) ATP-binding cassette, subfamily C, bacterial LapB
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
part
Pseudoalteromonas arctica
Pathway
part02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
part00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PARC_a1037 (lapB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
part02000
]
PARC_a1037 (lapB)
02044 Secretion system [BR:
part02044
]
PARC_a1037 (lapB)
Transporters [BR:
part02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PARC_a1037 (lapB)
Secretion system [BR:
part02044
]
Type I secretion system
Adhesin protein transporter
PARC_a1037 (lapB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_13
AAA_29
DUF87
Motif
Other DBs
NCBI-ProteinID:
ATC85707
UniProt:
A0A290S2G1
LinkDB
All DBs
Position
I:complement(1004602..1006740)
Genome browser
AA seq
712 aa
AA seq
DB search
MELNDVLDHGGILVDCLAVLCRHHDKEFSREALLNGLPLTDGNLTPSGFSRAAKRIGFKS
KVVNKPLQKINTALLPAILILKDNQACVINSIDYDKQVVSVIYPELTESVIEQSIDELAG
NSVGLIIYAQPEFAFDERTPVLEKLSKDGWFWGVIKECRSLYKDVIISAIALGFLSVAMP
LFVMNVYDRVVPNHATETLWVLAIGILIALTADFVLRLVRGYFVELAASRIDVKVSAVIM
ERVLGMKLKNRPSSAGSFASNIQSFEAVRNFFSSITLVALVDLPFVVLYLIVIAIIGVPL
SLPIIAGALILLAYAIAAHRKLEALSEQTMKASSMRNAVLVESLTNIEDVKSFHSECKTQ
SVWEKSTIYIAQVNAQSRLVSSSISNTASWIQQCVGVIIMIIGVHLVIEGELTQGGLIAA
YLLSSRAMGPIGQSAAVLAQYHHAAIAMQSLNEIMEKEVERPPGKHWLSHPILKGDIEFK
DVCFKYSDESHNALNGVSFKIKAGEKVAILGRNGSGKSTLEKLILGLYEPCSGAILMDNN
DIHQIDPAELRHNIGYVPQTVALFYGTLKDNLTISAWHAKDEQIIEACERSQLFDLINSH
PDGFDLQVGEQGRQLSGGQRQAVGMARAIINDPPILLLDEPTSSLDHNSESKIINNLKNY
TKNKTLIVVTHRSSLLELVDRIIVLDNGKVVADGPKQKVIAALNNKTVEQAS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaacgatgtacttgatcatggtggcatactcgttgactgcctagcagtttta
tgtcgccatcatgataaagagttttcaagagaagcactattaaatggacttcctctaact
gatggaaatcttactccatcaggtttttcgcgcgcagctaagcgcattggctttaaatcg
aaagtagttaataagccactacaaaaaattaatacagcactactgcctgccatcttaatt
ttaaaagacaatcaagcctgtgttattaattctattgattacgataagcaggtggtgagt
gtaatttacccagagcttaccgaatcagttatcgaacaaagcattgatgaattagcaggc
aacagtgttggtttaattatttatgcacaaccagaatttgcatttgatgagcgaacacct
gtacttgaaaaactatcaaaagacggatggttttggggagtaattaaagaatgccgctca
ctttataaagacgtaatcatttcagctattgcgttgggctttttgtcggttgctatgcct
ttatttgtaatgaatgtatatgaccgcgtagtgcccaaccatgcaaccgaaaccctttgg
gtacttgccattggtattttaatagcactcactgctgactttgttttacgcttagtaaga
ggctattttgtagagcttgctgcaagcagaatagatgtaaaagtatcggctgtaattatg
gagcgggtattaggtatgaaactaaaaaaccgtccatcatcagctggctcctttgcaagc
aatattcaatcatttgaagctgtacgtaacttttttagttccataacgcttgtcgcatta
gtcgacttaccattcgtagttttatatttaattgttatcgccattattggcgtacctcta
agtttacccattatagcgggcgcacttatattattagcttacgctatagccgcacaccgc
aaacttgaagccctttcagagcaaacaatgaaagcaagctcaatgcgaaatgcagtatta
gtagaaagtttaaccaatattgaagatgtaaaaagttttcactcagagtgtaaaacacaa
tctgtatgggaaaagtcgaccatttacattgcgcaagtaaacgcacaaagccgactcgtt
tcaagctctatatcaaatacagcatcgtggatacaacaatgtgtaggcgtgataataatg
ataataggcgtacacctcgttattgaaggtgagctaactcaaggcggattaattgcagcc
tacttattatcatctcgtgctatgggccctattgggcagtcagccgctgttttagcgcaa
tatcatcatgccgcaatagcaatgcagtcactaaatgagattatggaaaaagaggtcgag
cgcccacctggtaagcattggttaagccaccctattttaaagggcgatatagaatttaaa
gatgtatgttttaaatactctgacgaatctcataatgcactcaacggcgttagctttaaa
attaaagctggtgaaaaagttgcaattttaggacgtaatggctcaggtaaaagtacatta
gaaaagcttatcttagggctatatgaaccctgttcaggagcaattttgatggacaataac
gatatacatcaaattgaccctgcagagcttcgccataatattggttatgtaccgcaaacc
gttgccctgttttatgggaccttaaaagacaaccttacgataagcgcttggcatgccaaa
gacgagcaaattattgaagcctgtgagcgaagccaattatttgatttaattaattcgcac
ccagacggatttgatctacaagtaggcgagcaaggccgccaattatcaggagggcaacgc
caagcagtaggtatggcaagagctataattaacgacccaccaatactattactagatgag
ccaacctcatcgctagatcacaatagtgaaagtaaaattattaacaatttaaaaaattat
actaaaaataaaaccctaattgtagtgactcaccgctcatcattactcgagcttgttgac
cgtattatagttttagataacggaaaagtagttgctgatggaccaaaacaaaaagtaatt
gcggcgttaaataataaaaccgtggagcaagcctcatga
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