Pseudoalteromonas arctica: PARC_a1196
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Entry
PARC_a1196 CDS
T05179
Symbol
fimV
Name
(GenBank) pilus assembly protein FimV
Organism
part
Pseudoalteromonas arctica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
Motif
Other DBs
NCBI-ProteinID:
ATC85837
UniProt:
A0A290S2T3
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All DBs
Position
I:1150800..1155491
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AA seq
1563 aa
AA seq
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MRGLVTLIILASALIVTPVYSQDSTQLKGPKGVDYGAQGRSIGPIKPTDTLWRIAAKVRP
DNSVSIYQVMQALYNKNPNSFLEQNLNHIQNGAYLKIPTLAEIKGVNTQLAKQRSEQDDA
LWEKKKNGTLTQSEITSAQTKVTQARKVDVDDAKKEIQKELNEIKTEQSTKLVELQQQFK
NSVSNVEEILVENNNLKKQLSGISNELENLRLQLGQDSEIQNQLKELIVKQNEIIAQQKK
QEIVPKESFDLSSLFSNPIVLGLLMFIPGLLIIFAIVMFLRKRASNQEEPQNDDDFLPQT
PIYTGDDDLGPSLNDDPIVPDPLDDLSVQLDDNLENDMLPDDDLDDGLDDFSGGENLLDQ
DELESLLSDDIVFDDENTDDDDELDIFMQQGFDQPSDENAEDIDLDLSDDSINNDEILTN
DDLDSLFDEDDSLPEFDAPQTSEALEDDSLESHDEMAALSEELADDDNFDIDELLDQTST
ELDTSNNTSAELDTSDDFDLDDIDSLIDEANDPKSDVADDSIDAELLDEDELLEESDDFD
LDDIDSLIDEAAVDTADDSLVEESDDFDLDDIDNLIDEAAVDTANDSLVEESDDFDLDDI
DNLIDEAAVDTANDSLVEESDDFDLDDIDSLIDEAAVDTANDSLVEESDDFDLDDIDSLI
DEAAVDTANDSLVEESDDFDLDDIDSLIDEAAVDTADKSLVEKSDDFDLDDIDNLIDDEL
KNSDVRDSEIDNALADSVEDLADAQEELNVDDIESLASSLNEEPELTEEPELEEEPELEE
EPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEE
EPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEEEPELEE
EPELEEEPELEEEPELEEEPELLEELEPLEEPKLEEEPELEEEPELEEEPELEEEPELEE
EPELEEEPELEEEPELEEEPELEEEPELLEELEPLEEPELEEEPELEEEPELVEEPELYD
EPELDDEPELDDEPELAEEPELEEEPELAEEPKLEEEPELIDVTVDDFSDTSESLLDPED
ALEEYTDDTLKSVDELLSELQQATDDDYIETPDWSLDELDDDLEEIEVDLGDDPLAGDDD
SDLTEIEEQLDSELVTPSEELDEYPELELDDDQSLLENEPSFEPQELKGDASGDENAVAL
SQTEKDLANALMADVDLDSLEDDFDDELLIDNDFSELETETEIEDESLDDDLLQEINNEV
DSVEPPSIEDDIKPLNLDEVQETLESELPFTPEELQGDDLDGEAPGVASSQAEQDLANAL
MADADLDSLENDFDDEILIENDFSELDAEFDEDILEQALTDELSDESQEQTNAEREVQLT
SLDEVGSTDISSDDELDEEFMSNLTQTDFDSLLSELAEPEDLSVDDSSEFDVDSLLKEDL
ETDDSLTTKESLVEGSDVEQLDNDEFVDIDSLLEESDDAELEHEPYTDVNMDVGLSEFDA
LLAGDNPTDVDAESGGYSAKLDLARAYIEIDDFDSALKVIEDVINKGPEEVQEEALSLKA
KLK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtttagttacacttattatattagcgtctgcattgatagtaacgccagtttac
tctcaagacagtacccaattaaagggacctaaaggcgttgactatggtgcgcaagggcga
tctattgggccaattaaaccaacagatacactttggcgtatagcggctaaagtgcgccca
gataactccgtcagcatttatcaagttatgcaggccttgtataacaaaaaccccaactca
tttttagaacaaaatcttaatcatattcaaaatggtgcctatttaaaaatccctacttta
gccgaaataaaaggtgtaaatacacagcttgcaaaacaacgctcagagcaagatgatgca
ttatgggaaaagaaaaaaaatggcacacttacgcaaagcgaaattacctcagcacaaaca
aaagtaacccaagctcgtaaagtcgacgtagacgatgccaaaaaagagatacagaaagaa
ttaaatgaaataaaaacagagcaaagtactaagctggttgagttacaacaacaatttaaa
aattctgtaagcaatgtagaagaaattttagttgagaataataatcttaaaaaacaatta
tcaggtatttcaaacgaactcgaaaacttacgcttacagttaggacaagacagtgaaatt
caaaatcaattaaaagaactaattgttaagcaaaacgagattattgcacaacaaaaaaaa
caagagatagtaccaaaagaatcgtttgatttaagctcattattttcaaatccgatagtg
ctaggtttattaatgtttattcctgggctactgattatttttgcaattgttatgttttta
cgcaaacgagcaagtaatcaagaagagccacaaaacgatgatgactttttaccacaaact
ccaatttacactggcgatgatgatttaggcccaagtttaaatgacgatccaattgtaccc
gaccctttagatgacttgagtgttcaacttgatgataatctcgaaaatgatatgttgcct
gatgatgatttagatgacggcctagatgatttttcaggtggtgaaaatttactcgatcag
gatgagcttgaaagtctactaagtgatgacattgtttttgatgatgaaaataccgatgac
gatgatgaactcgatatttttatgcagcaagggtttgatcaaccttcagatgaaaacgct
gaagatattgatttagacttatcagatgactcaataaacaatgatgaaattctaactaat
gacgatttagatagcttgtttgatgaagacgatagtctacctgagtttgatgcaccgcaa
acaagcgaagctttagaggatgatagcttagagtctcatgatgaaatggcggctttaagt
gaggagcttgcagatgatgataattttgatatagatgaattattagatcaaacatcaaca
gaattagatacctcaaataacacttcagctgaacttgatacaagcgacgactttgattta
gacgatatagatagcttaattgatgaagcgaatgacccaaaaagtgatgtggcagatgac
tcaattgatgcagagttactcgacgaagatgaacttctagaagaaagcgacgattttgat
ttagatgacatagatagcttaattgatgaagcagcggttgacactgcagatgattcatta
gttgaggaaagtgatgactttgatttagacgacatagataacctaattgatgaggcagca
gttgatactgcaaatgattcattagttgaggaaagtgacgactttgatttagacgacata
gataacctaattgatgaggcagcggttgatactgcaaatgattcattagttgaggaaagt
gacgactttgatttagacgacatagatagcttaattgatgaggcagcggttgatactgca
aatgattcattagttgaggaaagtgacgactttgatttagacgacatagatagcttaatt
gatgaggcagcggttgatactgcaaatgattcattagttgaggaaagtgacgactttgat
ttagacgacatagatagcttaattgatgaggcagcggttgatactgcagataaatcatta
gttgagaaaagtgacgactttgatttagacgacatagataacctaattgatgatgaacta
aaaaattcagatgtaagagattcagaaattgataatgcattagcagactcagttgaggat
ttagcagatgctcaagaagaattaaatgttgatgatattgagtcgcttgcttcatcatta
aatgaagagcctgaacttacagaagagccagagcttgaagaagagccagagcttgaagaa
gagccagagcttgaagaagagccagagcttgaagaagagccagagcttgaagaagagcca
gagcttgaagaagagccagagcttgaagaagagccagagcttgaagaagagccagagctt
gaagaagagccagagcttgaagaagagccagagcttgaagaagagccagagcttgaagaa
gagccagagcttgaagaagagccagagcttgaagaagagccagagcttgaagaagagcca
gagcttgaagaagagccagagcttgaagaagagccagagcttgaagaagagccagagctt
gaagaagagccagagcttgaagaagagccagagcttgaagaagagccagagcttgaagaa
gagccagagcttgaagaagagccagagcttgaagaagagccagagcttgaagaagagcca
gagcttttagaagaacttgagcctttagaagagcctaagcttgaagaagagccagagctt
gaagaagagccagagcttgaagaagaaccagagcttgaagaagagcctgagcttgaagaa
gagccagagcttgaagaagagccagagcttgaagaagagcctgagcttgaagaagagcca
gagcttgaagaagagccagagcttttagaagaacttgagcctttagaagagcctgagctt
gaagaagagcctgagcttgaagaagaaccagaacttgtagaagagcccgagctttacgat
gagccagagcttgacgatgagcctgaacttgacgatgagcctgaacttgcagaagaacca
gaacttgaagaagagccagagcttgcagaagagcctaagcttgaagaagagccagaactt
atagatgtaacggttgatgatttttcagacacatcagagtcgcttcttgatcctgaagat
gcacttgaagaatatacagatgatactttaaagagcgttgatgagcttttaagtgagcta
caacaggccactgatgacgactatatagaaacacctgattggtctttagatgagcttgat
gatgatcttgaagaaatagaagttgatcttggtgacgatccgctagcgggcgacgatgac
tcagatcttactgaaattgaagagcagcttgatagcgagcttgtaacgccaagtgaagag
ttggatgaatatcctgaacttgaattagacgatgatcaatcattattagagaatgagcct
tcgtttgagccgcaagagcttaaaggggatgcatcgggtgatgaaaatgcagtagcactt
agtcaaacagagaaagatctcgcaaatgcgcttatggcagatgttgatttagatagttta
gaagatgattttgatgatgaactattaattgataatgacttctctgaattagaaactgaa
acggagattgaagatgagtcgcttgatgatgatttacttcaagaaattaataatgaggtt
gattctgttgaaccaccaagtattgaagatgacatcaaacctcttaaccttgatgaagtt
caagaaacattagaaagtgagttgccatttacccctgaagaattacaaggggatgattta
gatggtgaggcaccgggagtcgcttccagccaagctgagcaagatttagcaaacgcactt
atggcagatgctgatttagatagtttagaaaatgattttgatgatgagattttaattgaa
aatgatttttctgaattagatgctgaatttgacgaagatattttagagcaagcgctaact
gatgagttatcagacgaatcgcaagagcaaacaaatgcagagcgcgaagtacagttaaca
agcttagatgaagtgggtagcactgatattagctctgacgacgaacttgatgaagagttt
atgtcgaatttgacgcaaactgattttgattcattacttagtgagttagcagagcctgaa
gacttaagtgttgatgacagcagtgagtttgatgttgacagcttgctaaaagaagactta
gagacagatgattcattaactacaaaagagtcacttgttgaaggtagtgatgttgagcaa
cttgataatgacgaatttgtagatattgattcattattagaagaaagtgacgacgctgaa
cttgaacacgaaccttacaccgacgttaatatggatgtcggtttgagtgagtttgatgca
ttacttgcaggtgataacccaacggatgttgatgctgaaagtggtggctactcagctaaa
cttgatttagcgcgtgcttatattgaaattgatgattttgattctgcgcttaaagttatt
gaggatgtcattaacaaaggtcctgaagaagttcaagaggaagcacttagcttaaaagct
aaactaaaataa
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