Pseudoalteromonas arctica: PARC_a1264
Help
Entry
PARC_a1264 CDS
T05179
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03030
DNA replication
part03430
Mismatch repair
part03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PARC_a1264 (dnaE)
03430 Mismatch repair
PARC_a1264 (dnaE)
03440 Homologous recombination
PARC_a1264 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
part03032
]
PARC_a1264 (dnaE)
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a1264 (dnaE)
Enzymes [BR:
part01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PARC_a1264 (dnaE)
DNA replication proteins [BR:
part03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PARC_a1264 (dnaE)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PARC_a1264 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATC85901
UniProt:
A0A290S4F9
LinkDB
All DBs
Position
I:1221344..1224835
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPDFVHLRVHSDFSMVDGLAKTKPIVAKAQELQMPAIAITDQMNFCGLVRFYGATHNA
GIKPIVGADFWVRSPEFPDEPSRLTILAKDNDGYKNITLLISKAYQRGHVFHRPVIDREW
LVEHKTGLIILSGAKDGDLGKALLKNNPSVIESVVSFYKQHFSDNYYLELVRTNRPLEED
YLHMAVELATKEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSEEQYL
KTSEQMAELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGSLKIDEFLVKVSEDGL
EERLQFLFPDEEERKVKRVEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRNAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMIPGDPGMTLAKAFDIEPR
LQEAYDGDNEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWAVEMTNVRMERQGKDLVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEDGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHHPA
EFMAAVMSADMDNTDKIVILVDECENMKLTLLPPDVNAGEFKFTVNLQGEIVYGIGAIKG
VGEAPVDAILEARAKGGPFKDLFDFCARVDLKRLNKRVTEKLIYSGALDNLGPEKTQAGR
ATLLASLKSAMRAADQHNKAELLGQSDLFGLLATEPDEVEQAFIKATGLTDNEWLDGEKE
TLGLYLTGHPINQYRRELRHYTSGKIVDLQPTNRDVFATAAGLVIASRVLINKKGNRWAL
VTLDDKSARIDVRLYSDEFEKYQDMLQVNNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQVEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALAQLTLGIEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgattttgttcatttaagagttcattcagatttttcgatggttgacggc
cttgctaaaacaaagccaatagttgctaaagcgcaagagctgcaaatgcccgctattgcg
attaccgatcaaatgaacttttgtggcttagtgcgtttttacggcgcaacacataacgcc
ggtattaagcctattgtgggtgctgacttttgggttcgtagcccagaatttcctgatgag
ccaagccgcttaaccatattagccaaagacaacgacggctataaaaatattaccttatta
atatctaaagcgtatcaacgtgggcatgtgtttcatcgcccagtgattgaccgagaatgg
ctggtggagcataaaacgggcttaattattctctcgggcgctaaagatggtgacttaggt
aaagcgttattaaaaaataatccaagtgttattgaatcggtagttagcttttacaagcag
cattttagcgataactactaccttgaacttgtgcgcactaaccgaccgcttgaagaagac
tacttacacatggcggtagagcttgctaccaaagagcagttacctgttgtagcgaccaac
gaagtagtgtttttaaagcctgaaaactttgaagcgcacgaaattcgcgttgctattttt
gacggctacacgcttgacgataaacgcaggcctaaacgattctctgaagaacaataccta
aaaacatcagagcaaatggctgagctgtttagcgacattccagaagcgctacaaaacaca
gtagaaatagctaaacgttgtaatgtaacggttcagctagggacttactttttacctgat
tacccaactggctcacttaagattgatgagtttttagttaaagtgtcagaagatggcctt
gaagagcgattacagtttttattccccgacgaagaagagcgaaaagtaaaacgtgtagaa
tacgatgagcgacttgatatagagcttggcgtaattaaccaaatgggattcccaggttac
ttcttaatcgtaatggagtttattcagtggagtaaagataacaatattcctgttggacct
ggccgtggttcaggtgctggttcattggttgcttacgcacttaaaattactgacttggat
ccgcttgagttcgatttgctttttgaacgatttttgaatcctgaacgtgtatcaatgccc
gatttcgacgtcgatttttgtatggacagacgagacgaagtaattgatcacgtgtcggct
ttgtatgggcgtaatgcggtatcgcaaattattacctttggcaccatggctgcaaaagcg
gtaatacgcgatgtagggcgagtgcttgggcacccttacgggtttgttgatcgtatttct
aaaatgattccaggcgatcctgggatgacacttgctaaagcgtttgatatagaaccgcgc
ttgcaagaagcctacgatggcgataacgaagtaaaagatttaatcgacatgtgtcgcatc
ctagaagggtgtacacgtaacgccggtaaacatgcgggtggcgtagtaatatcgccaacc
actattaccgactttgccgcgctttattgcgatgacgaaggtaagtttccggtaacgcaa
tttgataaaaacgacgtagaaactgcaggcttagttaagttcgatttcttgggtttacgt
acactgactatattgcagtgggcggtcgaaatgaccaatgtgcgcatggagcgccaaggt
aaagacctcgttgatataaataccatcccacttgatgataaaaaaagtattgagttgcta
cttcgcgctgaaacgactgctgtattccagctagagtcgcgcggtatgaaagacttagta
cgccgacttaagcccgactgctttgaagatatgattgcactcgtggccttgttccgacca
ggtccgctgcaatctggcatggtagataactttatcgaccgaaaactgggccgcgaagaa
atctcatacccagatgcgcagtatcagcacgaaagcttaaaaccaatacttgatccaacg
tacggcattatcttgtatcaagaacaagtaatgcaaattgcgcaagtactagcaggttac
acgctaggtggcgccgacatgctgcgtcgtgcaatgggtaagaaaaaacccgaagaaatg
gcaaagcagcgttcaacgtttgaagatggcgcaagaaataacggcattgacggcgaactc
gcaataaaaatcttcgacttggtagaaaagttcgcaggttacggttttaataaatctcac
tcggcggcgtatgcacttgtttcgtatcaaacgctgtggatgaaaacgcatcatcctgca
gagtttatggctgcggtaatgtcggctgatatggataacaccgacaaaatcgttattttg
gtggatgaatgtgaaaacatgaagctcaccttattgccgccagatgtgaatgcaggtgag
tttaagtttacagtaaacttgcaaggcgagattgtttacggcattggcgcgataaaaggc
gtgggtgaagcaccggttgatgcaatattagaagcgcgtgcaaaagggggcccatttaaa
gatttatttgatttttgtgctcgagttgatttaaaacgcttaaataaacgcgtgaccgaa
aaattaatttattcaggtgcactcgataatttagggccagaaaaaacccaagctggccgt
gctacattactagctagtttaaaaagtgcaatgcgggcagccgaccaacacaacaaagct
gagctattagggcaaagtgatttgtttggtttattagccactgagcctgacgaagttgaa
caagcctttattaaagccacaggcctaactgataacgaatggttagatggtgaaaaagaa
accctaggcctttatttaactgggcatccgataaatcagtaccgccgtgagcttaggcat
tataccagcgggaaaatagttgatttacagccaacgaaccgcgatgtatttgcaacagcc
gcaggtttggtgattgcttctagggtattaattaataaaaaaggaaatcgttgggcctta
gtaactttagatgacaagagtgcacggattgatgtacgcttgtattcagacgagtttgaa
aagtaccaagatatgctccaagttaacaatatcttggtaatatctggacaggtcagcttt
gataacttctccggtggtattacaatgaccgccagagaaataaacaccattgctcaagcg
cgtgaaaagcgtattaaagcgattaaaatgacgctgaacatggtgcaagtcgaggcaggt
ttcttcgataaattacaaaaagtactcgaaccctataaaatgggaacgtgtccgatcaag
gtttattaccaacgtccagatgcgttggcacaattaactcttgggatcgaatggtgtgtt
acgccaagtgacgatttaattcataagttatcactaatggctgcgcaagatgtagaacta
gaatttaactga
DBGET
integrated database retrieval system
