Pseudoalteromonas arctica: PARC_a1356
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Entry
PARC_a1356 CDS
T05179
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
part
Pseudoalteromonas arctica
Pathway
part03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PARC_a1356 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a1356 (uvrB)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PARC_a1356 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PARC_a1356 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
DUF87
AAA_30
Kinesin
AAA
SLFN-g3_helicase
AAA_5
AAA_7
UB2H
Motif
Other DBs
NCBI-ProteinID:
ATC85981
UniProt:
A0A290S4P6
LinkDB
All DBs
Position
I:1319354..1321348
Genome browser
AA seq
664 aa
AA seq
DB search
MSDHFQLKSHFKPAGDQPTAIKQLCEGLEAGLAHQTLLGATGTGKTFTMANIINDLNRPT
IIMAHNKTLAAQLYGEMKEFFPKNAVEYFVSYYDYYQPEAYVVSSDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPKSYMKMMLLLKVGEKVDQRDMLRRLAEIQ
YTRNDIDFSRGTYRVRGEVVDIFPAESSTFAIRVEMFDDEIERLSIFDPLTGAVEKHIIR
TTIYPKTHYVTPREKILGAIDKIQEELKDRRAQLLSANKLVEEQRVTQRTQYDIEMMREL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRMPSAMDNRPLRFEEFEAISPQTIYVSATPGDFELDRCVGAIAEQVIRPTGLLD
PLIEVRPVGDQVDDLLSEIYKSVEKGERVLVTTLTKRMSEDLTDYLSEHDVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSIIQTIG
RAARHLDGRAILYGDKITKSMAKAMDETARRREIQHAYNIEHGIEPHSLAKKILDAMDVG
EEAGPKDNLRLVRKDSKKVLSAKEITVQIKQLETKMHAYASDLEFEKAGSVRDEIHELQQ
QLIN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaccattttcagttaaaatcacattttaaaccagcaggcgatcagcccacagcg
attaagcagctatgtgaaggattagaagcaggccttgcacaccaaactttattaggtgcc
accggtacaggtaaaacctttaccatggctaatattattaacgatttaaaccgtccaaca
ataataatggcgcacaataaaacgcttgccgcgcagctatacggggaaatgaaagagttt
ttccctaaaaatgcggttgagtattttgtatcgtattacgattactaccagccagaagcc
tatgttgtatctagcgacacatttattgaaaaagacgcctcaataaacgagcatatagaa
caaatgcgtttaagtgcgaccaaagcactgcttgagcgtcgcgacaccattattgtggcg
tcggtatcggctatttatggtttgggcgaccctaaatcatacatgaaaatgatgctactt
ttaaaagtgggcgaaaaagtagaccaacgcgacatgctacgtcgcctagctgaaatacaa
tacacccgcaacgatatagattttagccgtggtacatatcgtgtacgtggtgaagtggtt
gatatatttcctgcagaatctagcaccttcgcaattcgcgtagaaatgtttgatgacgaa
atagagcgtttaagtatttttgacccgcttactggcgccgtcgaaaagcatataatacgt
accactatctatccaaaaacacactatgttaccccgcgtgaaaaaatactcggtgctatc
gataaaatacaagaagaactaaaagatcgaagagcccagttactcagtgcaaataaatta
gtagaagagcaacgcgtaacacagcgtacgcaatacgatatagaaatgatgcgggagcta
ggttattgctctggtatagaaaactacagccgctatttatcgggccgtacgccgggcgat
ccgccacccacattacttgattacctcccagacgacgcattgatgattattgatgaatcg
cacgtaaccgtatcgcaaattggcgcaatgtataaaggcgacagaagccgtaaagaaaac
ttagttgagtatggcttcagaatgccctcagcaatggataataggccgctgcgctttgaa
gaatttgaagctatttcaccacaaacaatttatgtatcggcaaccccaggcgactttgag
ttagaccgttgtgtgggcgcaatagcagagcaagtaattcgtccaactgggctgcttgac
ccacttattgaagtgcgcccggtgggcgatcaggttgatgacttactttcagaaatttat
aaaagtgtagagaagggcgaacgcgtacttgtaaccactttgaccaaacgtatgtctgag
gatttaaccgattacttaagtgagcacgacgtaaaagtgcgttacttacattcagacata
gacacggttgaacgggttgaaattattcgtgatttacgtgcgggcgtgtttgatgtgtta
gtgggtattaacttacttcgagaaggcctagatatgccagaagtggcgctagtagccata
cttgatgccgataaagaaggctttttacgctcagcgcgttcaattattcaaaccattggt
cgtgctgcacgtcacttagatggccgcgctattttatacggcgataaaattacaaaatcg
atggctaaggccatggacgaaacagcgcgcagacgcgaaattcagcatgcttataatatt
gaacacggtattgaaccgcattcactagccaaaaagattcttgatgcgatggatgtaggc
gaagaagccggtcctaaagataaccttagacttgttcgtaaagactctaaaaaggtactt
agtgcgaaagaaattacagtgcaaattaagcagcttgaaaccaaaatgcatgcatacgca
agcgatctagaatttgaaaaagcgggctctgttcgcgatgaaatacatgaactacaacaa
cagttgattaattaa
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