Pseudoalteromonas arctica: PARC_a1854
Help
Entry
PARC_a1854 CDS
T05179
Symbol
msbA
Name
(GenBank) ATP-binding cassette, subfamily B, bacterial MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
part
Pseudoalteromonas arctica
Pathway
part02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
part00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PARC_a1854 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
part02000
]
PARC_a1854 (msbA)
Enzymes [BR:
part01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PARC_a1854 (msbA)
Transporters [BR:
part02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PARC_a1854 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_16
MMR_HSR1
AAA_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ATC86417
UniProt:
A0A290S4E9
LinkDB
All DBs
Position
I:1804529..1806298
Genome browser
AA seq
589 aa
AA seq
DB search
MLLYLESVMDQSTTQIYKRLVSYVGTYKSVAFVAIIGMIGYSAMDALFIQLMKPFIDQGL
NQRNTEVLKYAPFVVIALVLGRGVFNFMSSYCLSYVGSQVVRSLRQELFEHILHLPVSFH
DKNSTGDLISKITFDTEQVQQAITKALLIVVREGAFVVFLLAVMFYTSWQLSLIFLVIIP
LVAIIVAVVSKRFRHISKNIQSAMGQVTRSSEQMLSGHKVIHGFGGQDQEINHFSKINNH
NRQQRIKMDATKALSVSIIQILAASAMAVILWAVSLPSMIDTITSGDFMALIASMMMLLR
PLKQLANVNSDMQRGISAAQSIFLVLDEEMEKDTGTVSVDKVKGLIEVKNVTFKYPTKDE
AVLNDLSLTIEAGESIALVGRSGSGKSTISNLLPRYYDLELPSEILLDGIALQDYKLTDL
RRQFALVSQQVVLFNDTIANNICYGIKHDVSVAELEQVAKQAHVWEFVKDLPEQLNTMVG
ENGVMLSGGQRQRIAIARAILKDAPILILDEATSALDTESEKLIQQALETLMKDKTSIVI
AHRLSTIENSDRIYVIDNGRVIESGDHSSLLANDGTYSALCKMQFGDQA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgttactgtatttagagagtgttatggatcaaagtactacacaaatttataaacgtctt
gtctcatatgttggcacctacaaaagcgtcgcatttgtcgcaattattgggatgataggc
tattcagcaatggatgctttatttattcaattaatgaagccgtttattgatcaaggtttg
aaccagcgtaatacagaagttttaaagtacgctccttttgtcgttatcgcgttagttcta
gggcgtggtgtttttaactttatgtcttcctactgcttaagttatgtaggctcccaagtt
gtacgttctttacgccaagagttatttgagcacatattgcacttacccgtttcttttcat
gacaaaaactcaacgggagatttaatttcaaaaatcacatttgatacagaacaagttcaa
caagcgattactaaagccttgctaatagtcgtacgtgaaggggcatttgttgtattttta
cttgcggtaatgttctataccagttggcaactatcactgatatttttagtgatcatccca
cttgttgctattattgtcgccgtcgtctctaaacgttttcgccacatttctaaaaacatt
caatctgccatggggcaagttacccgtagctcagaacaaatgctgagcggacataaagtt
attcacggttttggtggtcaagatcaagagattaatcacttctcgaaaattaataatcat
aatcgtcagcaacgtatcaaaatggacgcaactaaagcgcttagtgtgtctataattcaa
attttagcggcaagtgccatggcagttattttgtgggcggtgtcgttgccatcaatgatt
gatacgattacatctggtgacttcatggcattaattgcctcaatgatgatgttattacgt
ccgctaaaacaacttgccaatgtgaatagtgatatgcaacgtggtatctctgcagcgcaa
agtatatttttagttttagacgaagaaatggaaaaagatacaggcactgtttcggttgat
aaagttaaaggtttaattgaagttaagaacgtaacctttaagtacccaactaaagatgaa
gccgtattaaacgatttgtcgctaacgattgaggcgggtgaaagtattgccttagtaggg
cgctcaggctctggtaagtcaacaatttctaacttgttaccccgctattatgatttagaa
ctaccgagtgaaatattacttgatggcatagcactgcaggactataaattaactgatctg
cgtcgccaatttgctttagtgtctcagcaagttgtgttatttaacgatacgattgccaat
aatatttgttatggcataaagcacgatgtgtctgttgcagagttagagcaagttgccaaa
caagcgcacgtgtgggaatttgttaaagacctgcctgagcaattaaacaccatggtaggc
gaaaatggggtaatgctctcaggtggtcaacgccagcgaatagcgatagcgcgtgcaata
ttaaaagatgcacctattttgattttagatgaggcaacgtcagcacttgataccgaatct
gaaaagcttattcagcaagcattagaaacgttaatgaaagataaaacctctattgttata
gcacatcgcttatctactattgaaaacagtgaccgaatttatgttattgataacgggcgt
gtgatagaaagtggcgatcatagtagcttattagcaaatgacggtacttattcagcactt
tgcaaaatgcagtttggtgatcaggcgtga
DBGET
integrated database retrieval system
