Pseudoalteromonas arctica: PARC_a2485
Help
Entry
PARC_a2485 CDS
T05179
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PARC_a2485 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a2485 (recD)
Enzymes [BR:
part01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PARC_a2485 (recD)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PARC_a2485 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
T2SSE
CbiA
AAA_28
NTPase_1
Mg_chelatase
Glutaminase
FtsK_SpoIIIE
PhoH
TrwB_AAD_bind
AAA
AAA_24
SRP54
Motif
Other DBs
NCBI-ProteinID:
ATC86969
UniProt:
A0A290S4X6
LinkDB
All DBs
Position
I:complement(2405009..2407063)
Genome browser
AA seq
684 aa
AA seq
DB search
MSDLNEQPGLFDDIDETLNNEAAEPLTSKNVAQDAPLEDIVLNNTITEVPLLEYLLAQNR
LRVVDVKLAELLCANDIEQTHNELFYIILLLCLSQQSQHSCLTLNEVDWSNPFNLRNSDF
NKLDGNVPSTLSPFSDDFNVHTALSYLQSHESVGENKPLQLFNERLYFARLAGYEQTLAD
RLLSMSERKLNINNEVLAELLNTYFPADSAIETDWQKVACAIAATKGFSVITGGPGTGKT
TTVTKLLAILQSLYKTAPLSIKLVAPTGKAAARLSESILGAKNKLTTIPDDIKTLIPQSA
QTIHRLLGVKPFTNKFRHNKSNPLHLDVLIIDEASMVDLSLMAKLIEALPAHARLILLGD
KDQLASVDTGSVMSDLCQGLTLGQTPSYSQARCDELNSLCFNNEPKLVAQSVSEFKLADC
IAFLQHSYRFDAQSGIGQLALAVNTNNTGILNYVEQESSEGRFNDVILDYDFVAKPIEKL
VKSAASHYAKYLNLIAQGASVAQVHAAFASYQLLAAVREGDYGVHSLNQRIERVLQQQGL
ITVSPNTHHYTGMPIMVSQNDYQLKLFNGDIGILMPDESNQLKAIFIDEQGNQRAFSPAR
LPAHDKVYVMTIHKSQGSEFSYTAMVLPPLKQARMGINRQLVYTGITRAKNTFELVADKK
VLQLAMNKSVSRASGLYERLKFEN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttaaatgagcaacctggcttgtttgacgatattgacgagacacttaataat
gaagccgcagagcctcttacttcaaaaaatgtagcacaagatgccccattagaggacatt
gtgttaaataatacgattaccgaagtcccgttacttgagtatttattagcgcaaaatcga
ctgcgtgtagttgatgtgaagctcgctgaattactgtgtgctaatgacattgagcaaact
cacaatgaactgttttatattattttattgctgtgcttatcgcagcaaagccagcatagc
tgcctaactttaaatgaggttgattggagtaatccttttaacttgcgcaacagtgacttt
aataaactcgatggcaatgtacccagtacgctaagcccgtttagtgatgattttaatgta
cacacagcgcttagttatttacaaagccatgaaagcgtaggcgaaaataaaccactgcaa
ctgtttaacgagcgactttattttgcgcgtcttgccggttatgagcaaacacttgctgac
agattattaagtatgagcgagcgaaagctcaatattaacaacgaagtattggctgaactt
ttaaatacctattttcctgcagattctgcaattgaaactgattggcaaaaagtggcatgt
gcgattgctgccaccaaaggctttagcgtgatcacggggggtcctggcacaggtaaaact
accacagtgactaagttactggctattttacagtcactttataaaaccgcgccccttagt
attaagctggtggcccctacaggtaaagccgctgcacgtttaagtgagtctattttgggc
gctaaaaataagctcacaacgattcctgatgatataaaaacgctgatcccgcaaagcgct
caaactattcatcgcttattgggtgtaaaaccgtttactaataaatttaggcataacaaa
agtaatccgctgcatttagatgtactaattattgatgaagccagtatggtcgatttatcg
ctgatggctaaattaatagaagcacttcctgcgcacgcgcgattaatactcctaggtgac
aaagatcagcttgcctcggtagataccggcagcgtaatgagcgatttatgccaaggttta
acacttgggcaaacgccaagctactcgcaagcacgttgtgatgagctaaatagcttatgt
tttaataatgagcctaagctcgtagcgcaaagcgtgagtgaatttaaactcgcagattgc
attgcctttttacaacacagttatcgatttgatgcacaaagcggcattggtcaactcgca
cttgcggtaaacaccaataacaccggtattttaaattacgtagagcaagaaagtagtgaa
gggcgctttaacgatgtaattttagattacgactttgtagcaaaaccaattgaaaagctc
gttaaaagtgcagcaagtcattatgcaaagtaccttaacttaatagctcaaggtgcaagt
gttgcacaggtgcatgctgcttttgctagttatcagcttttagctgcggtacgagagggc
gattacggcgttcatagcttaaatcaacgaatagagcgcgtgttgcaacagcaaggttta
attaccgtaagtcctaatactcaccactacacgggtatgcctattatggtgagccaaaac
gattatcaacttaagttatttaacggtgatattggtattttaatgcccgatgaaagtaat
caactcaaagccatatttattgatgagcaaggtaatcaacgagcattttcgccagcacga
ctccctgcgcacgataaagtctatgtaatgactattcataaatcacaaggttcagagttt
agctacacagccatggtactgccaccgctaaaacaagcgcgcatgggtattaacaggcaa
ttagtgtatacgggaataacccgtgctaaaaacacctttgagctggtggctgataaaaaa
gtactacaactagcgatgaataaaagcgtatcgagagcgtctggattgtatgaaagatta
aagtttgagaattaa
DBGET
integrated database retrieval system
