Pseudoalteromonas arctica: PARC_a2487
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Entry
PARC_a2487 CDS
T05179
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PARC_a2487 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a2487 (recC)
Enzymes [BR:
part01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PARC_a2487 (recC)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PARC_a2487 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ATC86971
UniProt:
A0A290S7J1
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All DBs
Position
I:complement(2410625..2413924)
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AA seq
1099 aa
AA seq
DB search
MLNIIQSNRMEALQAQFHQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPICIDEPLYLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVTIAPWQPDLWRRIVKLSQD
LGQSQFHRANMQGQLLAALETMDNSLLPQRISLFGISAIASSQLEVFEALSKKTEVILFF
FNPSEHYWGDIIDEKTAAKISAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDVFDDTLLGQVQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
ATDTSITLSDCHTPLREVERLHDYLLNLFNQNPTLTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIQYWLERVGVKWGINAAHKSSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHILSELLNAIYESESDDSWD
LLVLQNVLEELQKHHDNGDYSKAVSQRIVSYLVKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFVLSDKSEKTLPACLINQQHLQPFNSHYY
LADEQANTVLSNHSYNPIWLPSESIKPEPVIALDVTVPEQLDLDVFIRSVCSAQESFYQQ
TLGLRLPQFNEVAKDEEPFSLDALRRYFYLDEILKANINEQPLSTEQILQRGELPQANVG
SLIFESMEHRVDALAGQVKEHIKGGKSEPIEVLLTIEGTKIEGWLNHVYLQKQVFYRSAS
IKAKDLIKGFIYHLAAQSMDQQVETLLLGLDKQITFAPINKADADALLLDWFELYKALRA
EPVPFFPVSGYEYVKSGGDIIKAMSKFSPQYIGRGEGENPYIRLTVQSLNDCQEEFIKWS
DKLLTPLFEHAKESDHASA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatattattcaatcaaaccggatggaagccctgcaagcgcagttccaccagctg
ttaaaagtaaacccattgcaaagcccgttcgacaaagaagtagtgctagtgcaatcgccg
ggtatgtcgcagtggttaaaaataggtttgagcgaaaacttaggggttgcggcgcaggta
gattttccgctgccgtcgagctttatttggcagttgtatcagcaattactgccaaatgtc
cctaaagagtcggcatttaataagcccaaccttgcttggaagctgtttgccattttaccc
atctgtattgatgagccgctatatttaccgctaaaaacctatttagagggcgatattgac
gggcaaaaaacctttgcgttatgcgaaaaaatagccgatgtgtacgaccaatatttaatg
taccgaccgcactggatagccacatgggatagcggcaaagatgagcttgatgacgtagat
gtaaccattgccccatggcagcctgacttatggcgacgcattgtaaaactaagccaagac
cttgggcaaagccaatttcatcgcgctaatatgcaagggcagttactagcagcacttgag
actatggacaatagcttactgccacaacgcattagtttatttggtatatcggcgattgcc
agctcccagcttgaggtgtttgaagcgctgagtaaaaaaaccgaggttatattattcttt
tttaacccaagtgagcattactggggcgatattatagatgaaaaaacagcagctaaaata
agcgctaaatacgccaaaatgccgctggtggaagcgcaacaaaaaaaacaaaccaaccca
gatgaagaatactactttataggtaatccgttgttatcgtcgtggggtaaattaggtcgc
gactattttgaacaacttgtacagttagatgcccgttggattgatggttttattgatgtg
tttgacgacaccttgctagggcaagtacaaagcgagatttatcagcttgcgtttaaaggc
gaatcactgaccgataacaaagagtggtttataaacgacgaaggtaaattaccaatcagc
gcaaccgacaccagtattacgctcagcgattgccatacaccgcttagagaagttgagcgc
ttgcacgactacttacttaacttgtttaatcaaaacccaacgcttacccccaaagacata
attgtcatgatgcccgatgtaggcacttacagcccttatattgaagccgtatttggcggg
gcacaaggcagccgctttattccttacgcattggccgatttagccatagagcaagaaaag
cctgtccttagttcatttgcgagtttagctaacttaccgttttcgcgctttggtgtgtcg
gatattctcgatttattacaagtgacgcaaatagccgaaaaatttgggcttgaagcacac
gaatatgagcaaattcaatactggcttgaacgtgtaggggttaaatggggtataaacgca
gcgcataaaagcagctttgatttgcccgctatcgatttaaatacctggcaacatgggctc
aaccgtttactgcttggtattgccatgcgcgacgaacaatgcccttttaacggcatttac
agcgctgatgaagtagaaggtatggcgcttgatacactcaataagctcgtgcactttatt
gatgtactgcaaagctttaaagagcagctaacgcccgacgatacgctcactaataaagcg
catattttaagcgagctattaaacgccatatacgaaagtgaaagcgacgacagctgggat
ttattagtacttcaaaacgtgctcgaagagttacaaaaacaccacgacaacggcgattac
agcaaggcggtttcgcagcgtattgttagttacttagttaaacaaggcattcaagaaaaa
ggtgtagggcagcggtttttggtcgggcaagtaaacttttgtacgcttatgcccatgcgc
gccgtgccatttaaagtggtatgtatgctgggcttaaatgatgccgactacccacgtaac
gtacaacccattggttttgacttagtgccttactctaaaaagcaaaaaggtgaccgatca
cgtaaattagatgaccgttacttatttttagaagcgctattgagtgcccgcgacaaccta
tacatgagttacattggtcgctcgtgttttgataaccaaccgcgcatgccatcaacgctt
gtaagtgagctgttagagtatattgggcgtagttttgtattaagcgataaaagcgaaaaa
acgctgcccgcatgtctaatcaatcagcagcatttacagccctttaatagccattattac
ttagccgatgagcaagccaatactgtgctgagcaaccacagttacaatccaatttggctg
ccaagtgagtcaattaaaccagagccagttattgcacttgatgtgactgtgccagagcag
ctagatctagatgtgtttattagaagtgtgtgcagcgcacaagagagcttttatcagcaa
acattaggtttacgcctgccacaatttaacgaagtagcaaaagacgaagagccatttagt
ttagatgcgctgcgccgttatttttaccttgatgaaatacttaaagccaatataaacgag
caaccactaagtaccgagcaaatactgcagcggggtgagttacctcaagctaatgtaggc
agcctcatatttgaaagtatggagcaccgagttgatgcgcttgcagggcaagtaaaagag
catattaaaggcgggaaaagtgagccaatagaagttttgcttaccattgaaggcactaaa
atagagggctggctcaatcatgtgtatttgcaaaaacaagtgttttaccgcagtgcgagt
attaaagcgaaagatttaattaaaggctttatttatcacctcgcagcgcaaagtatggat
caacaagtagaaacattgttacttgggctcgataagcaaattacctttgcgccaattaat
aaagctgatgccgatgcattgctgcttgattggtttgagttatacaaagcactgcgcgca
gagcctgtgccattttttccggtaagtggttatgagtacgttaaaagcggcggcgatata
ataaaagcaatgagcaaatttagcccgcaatacatagggcgaggcgagggcgaaaacccg
tatattcgcttaacggtgcaatcgctaaacgactgccaagaagaatttataaaatggagt
gataaattgctcacgcctttatttgaacacgcaaaggagagtgaccatgcaagcgcttaa
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