Pseudoalteromonas arctica: PARC_a2737
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Entry
PARC_a2737 CDS
T05179
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PARC_a2737 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
part03019
]
PARC_a2737 (pnp)
03016 Transfer RNA biogenesis [BR:
part03016
]
PARC_a2737 (pnp)
Enzymes [BR:
part01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PARC_a2737 (pnp)
Messenger RNA biogenesis [BR:
part03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PARC_a2737 (pnp)
Transfer RNA biogenesis [BR:
part03016
]
Prokaryotic type
tRNA degradation factors
PARC_a2737 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
S1_2
KH-I_KHDC4-BBP
aRib
DUF3016
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ATC87190
UniProt:
A0A290S7J9
LinkDB
All DBs
Position
I:complement(2668483..2670609)
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AA seq
708 aa
AA seq
DB search
MQAIIKEFKLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKREAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPSGFVNEVQVIATVVSVN
PEIQPDMVAMIGTSAALAISGIPFSGPIGASRVGYINGEYVLNPTLKELEESQLDLVVAG
TDKAVLMVESEANVLAEDVMLGAVVYGHEQSQAIITAIEEFKAEAGKPTWDWTAPAKNVA
LEDKVAAIAADKVGAAYLITDKVARKEALGVAKDEVVAVLTAELAEGESLDKQEIGKIFG
SLEKKIVRGRIASGEKRIDGREPDMIRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTHKNHFMLNYNFPPFCVGETGFVGSPKRREIGHGNLAKRGIAAVMPTL
TEFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEDDKFVVL
SDILGDEDHLGDMDFKVAGTAAGITALQMDIKIEGITQEIMQIALKQAKAARLHILEVMD
EAISAPSEELSMFAPRIYTMKIPQKKIAEVIGKGGATIRQLTEETGTTIEIGDDGTIKIA
ATDGESAANAISRIEQLTAELEVGTIYEGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVADHLSEGQEVKVKVLEVDRQGRVRLSIKEAMESAAPAADAPTDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattattaaagaattcaaactaggtcaacatacagtgactctagaaactggt
gcaatcgctcgtcaagcagacggcgctgtacttgcaagcattggcgacacttcagtttta
gtaactgttgttggtaagcgtgaagcacaacctggccaagactttttcccactaacagtt
aactaccaagagcgtatgtacgctgctggtcgtatcccaggtggtttcttaaagcgtgaa
ggtcgtcctaacgatggcgaaacacttattgcacgtcttattgaccgtccaattcgtcca
cttttcccaagcggttttgtaaacgaagtacaagttattgctactgttgtttctgttaac
cctgaaatccaacctgatatggttgcgatgattggtacttcagcagcacttgctatctct
ggtatcccgttcagtggtccaattggtgcatctcgcgttggttacatcaacggcgaatat
gtacttaaccctacattaaaagagcttgaagaaagccaacttgatttagtggtagccggt
actgataaagcggtacttatggttgaatcagaagctaacgtacttgcagaagacgtaatg
cttggcgctgttgtatatggtcatgagcaatctcaagcgatcatcactgcaatcgaagaa
tttaaagcagaagcaggcaagcctacttgggattggactgcaccagctaaaaacgttgca
ctagaagataaagttgcagcaattgctgctgataaagtaggcgcagcttacttaatcact
gataaagtagcgcgtaaagaagcacttggcgtagctaaagatgaagttgttgcagtgtta
acagctgaacttgctgaaggcgagtctttagataagcaagaaattggtaaaatattcggt
tcacttgagaagaaaatcgttcgtggccgtatcgcttctggcgaaaaacgtatcgatggt
cgtgaaccagatatgattcgtgcactagatgtaatgactggcgtattaccgcgtactcac
ggttctgctatctttactcgtggcgaaactcaagcgttagtaacagctacacttggtaca
gaacgtgattcacagttaatcgacgatttaactggtactcataaaaaccactttatgctt
aactacaacttccctccattctgtgtaggtgaaactggttttgttggttctcctaagcgt
cgtgaaatcggccatggtaaccttgctaagcgtggtattgctgctgtaatgccaacattg
actgaattcccatattcaatccgtgtagtatctgaaatcactgaatcaaatggttcatct
tcaatggcttctgtatgtggtacttcacttgcacttatgaatgccggtgtaccaattaaa
gcgtctgttgccggtattgcgatgggtctagttaaagaagacgataaattcgttgttctt
tctgacatcttaggtgatgaagatcacttaggtgacatggactttaaagttgctggtaca
gctgcaggtatcactgcacttcaaatggatatcaaaatcgaaggtatcactcaagaaatc
atgcaaattgcgcttaaacaagcaaaagctgcacgtttacatatcttagaagtgatggac
gaagcaatttctgctccttctgaagagctatcaatgtttgctcctcgcatatacacaatg
aaaatcccacagaagaaaatcgctgaagttatcggtaaaggtggcgcaactattcgtcag
cttactgaagaaactggtacaacgattgaaatcggtgacgacggtacaattaaaattgcc
gctactgatggcgaaagtgcagctaatgcaattagccgtattgagcaattaacagctgaa
cttgaagtaggtactatctacgaaggtaaagttgtacgtattgttgatttcggtgcgttt
gtaaacattcttcctggtaaagatggtctagtacatatttctcaaattagtactgagcgc
gttaataacgtggctgatcacctttctgaaggtcaagaagttaaagttaaagtactagaa
gtagatcgccaaggccgtgtacgtctaagtattaaagaagcaatggaatcagcagcacct
gcagctgacgcgccaactgacgcgtaa
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