Pseudoalteromonas arctica: PARC_a2747
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Entry
PARC_a2747 CDS
T05179
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a2747
Enzymes [BR:
part01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PARC_a2747
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PARC_a2747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
ATC87198
UniProt:
A0A290S4W2
LinkDB
All DBs
Position
I:2679360..2680916
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AA seq
518 aa
AA seq
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MTHHKTLRLILGDQLNPSHSWYKQKNDDTLYLIAELKQETDYVKHHIQKLCAFFNAMENF
ATALNTAGFNVLHLTLDDTDDDKDLIELLKRVADKYQCDSIEYQYPDEFRLKSQLAKFKS
DSSLNVIATDTEHFLLPFTDIKTRFTKNKHVTMEHFYRAMRKQLNILIYDAKPTGGKWNF
DSNNRNKFSKKDLADIPQPKLFNTDVSSIISRLNKHNVAYLGEINEHSLEWPTTRKQAIE
SLEYFCEHLLSRFGHFQDAMTDQSKNNTSLYHSRLSFALNAKILHPLYVIKRVISEYEQR
PNEISLSQVEGFTRQILGWREYVRAIYWINMPDYAVKNQLQAKNKLPSYFWNSSTKMNCL
SHSLKQSLETAYAHHIQRLMVIGNFCMLTGINPDDVDNWYLGVYIDAIEWVEMPNTRGMS
QFADDGIIATKPYAASGNYINKMSDYCKSCQYDVKQKVGDKACPLNSLYWHFMNRHRDRL
EKNPRIGMVYKNWDKQDETLQEQTLQQATYYLNNLEAL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcacaaaacactcagactaatactaggcgatcagctaaacccatctcattca
tggtacaagcaaaaaaacgacgacacgctttacctcatcgcagaactaaaacaagaaact
gactacgttaaacatcacattcaaaaactgtgtgctttttttaatgctatggaaaacttt
gcaactgcattaaacacggcaggttttaatgttttgcatttaacacttgatgataccgat
gacgacaaggacttgattgaattactcaagcgagttgccgataaatatcaatgcgactct
attgaatatcaataccctgacgagtttaggctaaaatctcaattagctaagtttaaaagt
gatagctcattaaatgtaattgctacagatactgaacactttttattaccgttcaccgat
ataaaaacacgctttacaaaaaacaagcatgtaacaatggagcacttttatcgtgctatg
cgtaagcaacttaatatattaatttatgatgcaaagccaactggtggcaaatggaatttt
gatagtaataatcgtaataaattttccaaaaaagacttagccgacatcccacagcctaag
ttattcaatactgatgttagcagtattatttctcgtttaaataaacacaacgtcgcttat
ttgggtgaaataaatgaacattcactggagtggccaacaacgcgtaaacaagcgattgaa
tctcttgaatacttttgtgagcacttacttagtcgctttggtcactttcaagatgcgatg
acagatcaaagtaaaaataataccagcctgtaccatagccgtttatcgtttgccctaaac
gcaaaaatactccacccgttatatgtaatcaaacgtgtaataagcgaatacgaacaaaga
cccaatgaaatatccctctcgcaagtagagggctttaccaggcaaatattaggctggaga
gagtatgtacgtgccatttattggattaacatgcccgactacgcagttaaaaatcaatta
caagccaaaaataaactgccatcttatttttggaacagctctacaaaaatgaattgtcta
agccactcactcaagcaaagccttgaaaccgcttatgctcatcatattcagcgcctaatg
gttattgggaacttttgcatgctcacaggaataaaccctgatgacgtagacaactggtac
ttaggcgtttatatagatgccatagaatgggtagaaatgcccaacacccgaggcatgagt
cagtttgccgatgatggaataattgcaacaaagccttatgctgcaagcggtaactacatt
aataaaatgagcgattactgcaaaagctgtcagtacgatgttaaacaaaaagtaggagat
aaagcctgcccgctaaatagcttgtattggcatttcatgaatagacacagagacaggcta
gaaaagaacccacgtattggtatggtatataaaaactgggataaacaagatgaaacactt
caagaacaaacgctgcaacaagcaacctactaccttaataatttagaagcgctttaa
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