Pseudoalteromonas arctica: PARC_a3694
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Entry
PARC_a3694 CDS
T05179
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
part
Pseudoalteromonas arctica
Pathway
part03420
Nucleotide excision repair
part03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PARC_a3694 (uvrD)
03430 Mismatch repair
PARC_a3694 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a3694 (uvrD)
Enzymes [BR:
part01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PARC_a3694 (uvrD)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PARC_a3694 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PARC_a3694 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
DUF3553
SAP18
Motif
Other DBs
NCBI-ProteinID:
ATC88026
UniProt:
A0A290S7G8
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All DBs
Position
I:3580998..3583163
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AA seq
721 aa
AA seq
DB search
MDVSQLLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRGRVEETLKAPVGGMWIGTFHGLSHRILRAHHREANLPEAFQILDSDDQL
RMIKRLLKSMNIDDKKWPAKQFGWYISAKKDEALRPKDIQAYDINEQMMLRVYAAYQEAC
DRAGLVDFAEILLRSYEVLKNNPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGDTN
SIMIVGDDDQSIYGWRGAKIENIKRFLTDFSAETIRLEQNYRSTATILKASNALIQNNSE
RMGKSLWTDGNDGEPISIYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRSNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALSYLRLVGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAIVEQQHLSGRASGAVSKFVELVEQIEDKISDLTLHEQAK
YTIQTSGLMAMYQAEKGEKGRARVENLEELISACDQYELPEDEEYSSPLQGFLAHTSLES
GEGQAEEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKYHSPSRFLREIPEDCVEEIRIKTQVSRPPAAGRFSAS
VSHAAFEDSGFNLGQRVLHAKFGVGTVLNYEGSGAQSRVQVNFDDLGSKWLVTAYARLQA
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacaattactcgatggcttaaatgacaaacaacgcgatgccgttgcagcc
ccactacaaaacatgctggtattagcaggtgctgggtctggtaaaacacgagtgttagtt
catcgtattgcgtggcttatgcaagttgagcaagcctccgcttacagtatttttgcagtt
acctttactaataaagccgctaaagaaatgcgtggccgcgttgaagaaacactcaaagcg
cctgtaggtggtatgtggattggtactttccatggtttatcgcatcgtattttacgtgct
catcaccgtgaagctaacttacctgaagcctttcaaattttagactctgacgatcagctt
cggatgatcaagcgcttattaaaatcgatgaatattgatgataaaaaatggcctgctaaa
caatttggctggtacataagcgccaaaaaagatgaagcacttcgccctaaagatattcaa
gcatacgatattaacgagcaaatgatgctgcgtgtttatgccgcctatcaagaggcctgt
gatagagcgggcctagttgattttgctgaaatattactacgcagctacgaagtattaaaa
aataaccctacgttactacgtcattatcagcaacgctttgcacatatgctcgtagacgag
ttccaagatacaaataccattcaatatgcttggttaaagttacttgctggcgatactaac
agcattatgattgtaggcgacgatgaccaaagcatttatggttggcgtggtgctaaaatc
gaaaacattaaacgttttttaactgacttcagtgcagaaaccattcgccttgaacaaaac
taccgttcaaccgcgactattttgaaagcgtccaacgcattaattcaaaataactcagaa
cgtatgggtaaaagcttgtggaccgacggtaacgacggcgagccaatctctatttatgca
gcatttaatgagttagacgaagcacgctttgtaagtagcaaactacgaagctggttaaat
gcaggtaatgccctacaagatgccgcaattttataccgtagtaacgcgcaatctcgtgta
ctcgaggaggccatgctgcaagaaggcttaaaataccgtatttatggtggtatgcgattc
ttcgaacgacaagaaattaaagatgcgctttcgtacttacgtctagtgggtaatcgtcaa
gacgatgccgcgtttgaacgtgtaattaatacgccagcacgcggtattggtgataaaaca
ttgagccatatacgtgattgtgcacgagcagaatcattaccgctttggtatgccgcaaaa
gcaattgtagaacaacagcatttatctggtcgtgcttctggtgcagtaagtaagtttgta
gaactagttgaacaaatagaagataaaattagcgatctaactttgcatgagcaagccaag
tacacaattcaaacctcaggcttgatggcaatgtaccaagctgaaaaaggtgaaaaaggc
cgtgctcgcgtagaaaacttagaagaactaattagcgcatgtgaccagtacgaacttcct
gaagacgaagaatacagctcgcctttacaaggctttttagcacatacatcacttgagtca
ggtgaagggcaggcagaagaacacgaagacgctgttcaaatgatgacacttcactcagcg
aaaggattagagtttccgttagtgtttatggtgggcgtagaagaaggcatgttcccttct
cagcaaagtaacgaagagtcgggtcgcttagaagaagagcgccgcctttgttatgtaggc
atgacacgagcaatggataagttatacattagccatgctgagagtcgccgcttatacggg
caagaaaaataccatagcccatcacgctttttacgcgaaatacctgaggactgcgtagaa
gaaatccgtattaaaacacaggtttctcgcccgcctgccgccgggcgttttagtgcatca
gttagccatgcagcatttgaagacagtggctttaacttaggacaacgagttttgcatgct
aagtttggtgttggtaccgtacttaattacgaaggcagtggcgcgcaatctcgcgtacaa
gttaactttgacgaccttggcagtaaatggttagtaacggcctatgcacgattacaagct
gtataa
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