Pseudoalteromonas arctica: PARC_a3815
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Entry
PARC_a3815 CDS
T05179
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
part03009
]
PARC_a3815 (dbpA)
Enzymes [BR:
part01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PARC_a3815 (dbpA)
Ribosome biogenesis [BR:
part03009
]
Prokaryotic type
rRNA helicases
PARC_a3815 (dbpA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
Helicase_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATC88140
UniProt:
A0A290SA86
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All DBs
Position
I:complement(3700681..3702069)
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AA seq
462 aa
AA seq
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MTSTAFSSLALPAGLVDNLSTLGYAHMTPVQAQSLPPVLAGKDIIAQAKTGSGKTAAFSL
GVLAKLNVKRFRIQSLVLCPTRELAEQVAVEMRKLARGIHNIKILTLCGGVSIGPQIGSL
EHGAHIIVGTPGRVDDHIRKGTLRLDDVETLVLDEADQMLDMGFQDTLDAIIERIPQNRQ
TLLFSATFPRAIEAIAKRVLKNPEMVKVEEEQAKSTIKQYFYKMDNNKQRYPTLKLLLLK
FTPQSCVVFCNTKVETQQVCDDLADEGFSAVSLHGDLEQRDRERTLIHFSNKSASILVAT
DVAARGLDIDDMDMVINYHLAHDTQTHVHRVGRTGRAGKKGIACSIYGEAEAFKIAQIGE
HYERDITPEQMPPFNLLDKPPYRPEMVTLMIDSGKKQKVRAGDILGALTGKDGVAGRQVG
KINVLDNVAFVAVERNSLKPALRKLTEGNIKGRKIRARRLTR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcaactgctttttcatctttggctttaccagctggactcgttgataatttatca
acacttggttatgcgcatatgacacctgtacaagcgcaaagtttaccgcctgtacttgct
ggtaaagacatcattgctcaggcaaaaaccggttcaggtaaaactgctgcgtttagcttg
ggtgtgttagctaaattaaacgtaaaacgctttcgtattcaatctttagtgttgtgtcct
actcgtgagcttgccgagcaggttgcggttgaaatgcgtaaattagcgcgcggtatccat
aacattaaaatattaacgttatgtggcggtgtatcaattggtccacaaataggctcgctt
gaacatggcgcgcatattattgttggcacacctgggcgtgttgatgaccatattcgtaaa
ggtactttacgtttagatgatgttgaaacattggtacttgatgaagccgatcaaatgctt
gatatgggttttcaagatacacttgatgcaattattgagcgcattccacaaaatcgtcaa
acattgttatttagtgcaacattcccaagagctattgaagcaattgctaagcgtgtactt
aaaaatccagaaatggttaaagtagaagaagagcaagccaaaagcacaattaagcagtac
ttctacaaaatggataataataagcagcgctacccaacgctaaaattattattacttaaa
tttacaccacaaagctgtgttgtgttttgtaatactaaagtagaaacacaacaagtgtgt
gacgatttagctgatgaaggctttagtgctgtttcgctacacggtgatttagaacagcgc
gatcgtgaacgtacgttaattcacttttcaaataaaagtgcttcaatacttgttgcaacc
gatgttgctgcacgtggtttagatattgacgacatggatatggtgattaactaccattta
gcacatgacacgcaaacacatgtgcatcgtgttggtcgtacaggtcgcgctggtaaaaag
ggcattgcatgttctatttacggtgaagcagaagcgtttaaaattgctcaaataggcgaa
cattacgaacgtgatattactccagagcaaatgccaccatttaatttattagacaagcca
ccgtaccgccctgaaatggttactttgatgattgattcaggtaaaaaacaaaaagtacgt
gcaggtgatattttaggtgctttaacgggtaaagatggggttgcaggtcgtcaggtgggt
aaaattaacgtacttgataacgtagcgtttgttgctgttgagcgtaactcattaaaacct
gcgcttcgtaaattaaccgaaggcaatattaaagggcgtaaaatacgcgcacgtcgcctt
actcgttaa
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