Pseudoalteromonas arctica: PARC_b0703
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Entry
PARC_b0703 CDS
T05179
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_b0703 (phrB)
Enzymes [BR:
part01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PARC_b0703 (phrB)
DNA repair and recombination proteins [BR:
part03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PARC_b0703 (phrB)
Prokaryotic type
PARC_b0703 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATC88872
UniProt:
A0A290S9Y7
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All DBs
Position
II:658342..659736
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AA seq
464 aa
AA seq
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MDTLFWFRRDLRLFSNEALIQALNNGAKHAIFFVSEKQWQQHQTAPIQIDLLKRRVTYLQ
SQLADYGITLHVIEAPSFSDCTRELIDFCKANDVKHVIANTEYELNEVNRDKAILHECDE
LSITFTLYEGDLIAPVGTVKNQSNEMYKVFTPFKRAWLKQYQDTHFSLPQWPLTSEPTKF
DESGLLKSDGCSDKWPVDDETLSTVVDNFICDKLTSYDDQRDIPSVKGTSGLSPYLALGI
VSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLSRGDNFNEKYNA
VVWRKSENEFTAWCEGRTGFPLVDAAMLQLKQTGWMHNRLRMVVASFLTKHLLIDWREGE
RFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPTGKFIRKYLPELE
NVPDKHIHFPHTYLAAIGKDKECYWPAIVDHKAARERALAAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggatacattattttggtttaggcgcgatttgcgccttttttctaatgaagcgttaatt
caagcgctaaacaatggcgctaaacacgccattttttttgtgtctgaaaaacagtggcaa
caacaccaaactgcgcctattcagattgacttactcaagcgccgagttacttatcttcaa
tctcagcttgctgattacggtattactttacatgttattgaagcacctagcttttctgat
tgtacgcgtgagcttattgatttttgtaaagcaaacgatgtaaaacacgtaattgctaat
acagaatatgagcttaatgaagtaaaccgcgataaagcaattttgcacgaatgcgatgag
ctttctattacttttactttgtacgaaggtgatttaattgcacctgttggaacggtcaaa
aatcaaagtaatgaaatgtataaagtatttactcctttcaaacgagcatggttaaagcag
tatcaagatacacactttagtttgcctcaatggcctttaacttctgagccaacaaaattt
gatgaaagcggcttactaaaaagtgatggatgctcggataagtggccggttgacgacgaa
acactttctactgtggtcgataactttatatgtgacaaacttacaagctacgacgatcag
cgtgatatacccagcgtaaaaggcacatcaggtttaagcccgtatttagcacttggtatt
gtaagcacaaaacagctgcttattaatattcagcagcgttatcctgatattttaactacg
tcaaaaagtaaaacgtttacgtggattaacgagcttgtttggcgcgaattttacaggcat
ttaattgctgaatttccgaagctttcgcgcggtgataactttaacgaaaagtataacgcc
gtagtgtggcgtaaaagcgaaaatgaatttacagcatggtgtgaagggcgtacaggtttc
ccgttagtagatgctgcaatgctacaactaaagcaaaccggttggatgcacaatcgttta
cgtatggttgttgcgagctttttaactaagcatttattaatagactggcgcgaaggtgag
cgcttttttatgcagcacctaattgatggcgatttagcctcaaataatggtggctggcag
tgggctgcaagtaccgggtgtgatgctcagccttactttagagtttttaaccctatcaga
caaagcgagcgctttgatccaactggcaagtttatccgtaagtatttgccagagcttgaa
aacgtgccagataaacacattcattttccacacacttatttagccgcaataggtaaagat
aaggaatgttactggccagcaatagttgatcataaagcggcacgagaacgtgcacttgct
gcatttaaggtgtga
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