Phalacrocorax aristotelis (European shag): 142048303
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Entry
142048303 CDS
T11493
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142048303 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142048303 (HCFC2)
03029 Mitochondrial biogenesis [BR:
parx03029
]
142048303 (HCFC2)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
142048303 (HCFC2)
Mitochondrial biogenesis [BR:
parx03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
142048303 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Seadorna_VP2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
142048303
NCBI-ProteinID:
XP_074931142
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All DBs
Position
1:157517180..157537658
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AA seq
822 aa
AA seq
DB search
MAAAAAGLSWRRVSSFTGPVPRSRHGHRAVAIRELVIIFGGGNEGIADELHVYNTATNQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKVKAQAPS
TGSPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSI
PVTKGILPSPRESHTAIVYCRKDLGSPKMYIFGGMCGCRLNDLWELDIETMTWSRPETKG
TVPLPRSLHTANVIGNKMYVFGGWVPQSAGGEISAHDGEWKCTGSFSYLNLDTTEWIGLI
SDCQEDKSNLLPGPRAGHCAVAVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKPPAP
SQVQLIRATTNSFQVKWDEVPTVEGYLLQLHADSPVPSVAGIPGTGVPETSVLSSQGGSS
LHHSPQSLPSVPYPEVKVDHPSQTNNVIPNNVQVSLSSNSLKVEGKEKVAAPENKITQEA
MKNHADATGFKESNAPSLLPVCTSSSQTSANVGELHDLDKRTVNPDASVSSTVSSTQTMV
TQQAVKTESSSTNGAVVKDETSLTTFNSKAEAAETAYIMPSTRVNTGQTNDSHSSKTPQR
QTAPVKTRDRQWYDVGIFKNNSAVVSQFYLLPEETLSVSNKMESADVPDYRLLKKQDLFP
GTVYRFRVAAINGCGVGPFSKVSEFKTCIPGFPGAPSTVKITKSVDCIHLSWEPPASPSG
NILEYSAYLAIRSTQLQENPSQLVFMRIYCGLKTSCIVTAAQLSNAHVDYTSRPAIVFRI
SAKNERGYGPATQVRWLQGKVSVSCSISVGCSCGGGNGVLSL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccgctggactgagctggagacgggtgtcttcctttacggggccggtg
cctcgctcccgccacgggcatcgtgctgtcgccatccgcgagctggtcattatcttcggg
ggtggcaacgagggcatcgccgatgagctgcacgtctacaacacggctacaaatcagtgg
tttcttcctgctgtaaggggagatattcctccaggctgcgcagcacatggatttgtttgt
gacggtaccagaatactagtctttggaggaatggttgaatatggaagatacagtaatgat
ttatatgagttacaggcaagtcgatggctctggaaaaaagtaaaagctcaagctccctct
actggatcaccaccttgccctcgacttggccacagcttttctttatatggtaacaagtgc
tatttgtttggtggcctggcaaatgaaagtgaggattcaaataataatgttcccagatat
ttaaatgatttctacgaactggagctgcaacatggttctggagttgtcggctggagtatt
cctgtgaccaaagggatcttgccatctcctcgagaatctcacacagccatcgtatactgc
agaaaagatttgggaagtccaaagatgtatatttttggagggatgtgtggctgtcggctt
aatgatctctgggaacttgacatagaaaccatgacctggtcaagaccagaaactaaaggg
acagtaccacttcctcgcagtctccatacggccaatgtaataggaaacaaaatgtatgtt
tttggtggatgggttccacagtcagcaggaggtgaaatttctgctcatgatggtgaatgg
aaatgtaccggttcattttcttatcttaatttggataccacagaatggataggtctgatc
tcagattgccaggaggacaaaagtaacttgttaccagggccaagagcaggacactgtgct
gtagccgttggcactcgtctgtatatctggagtggtagagatggttacagaaaagcttgg
aacaatcaagtttgctgcaaagatctttggtaccttgatactgagaaacctccagcacca
tcacaggtacagctgattagagctacaaccaactcttttcaagtgaaatgggatgaagta
cctacagttgaaggatatcttcttcaattacatgctgactcaccagtgccatcagtggct
ggaatacctggtactggggtccctgagacatcagtgctgagttcacaaggtggctcttct
ctacatcacagtccacaatcattgcctagtgtcccttatccagaagtgaaggtggatcat
cccagccaaacaaataatgtcattcctaataacgtccaagtttccctttcatccaactca
ttaaaagtagagggaaaggaaaaggttgccgcacctgaaaacaagattacacaggaggct
atgaaaaaccatgcagatgctacaggattcaaagaatcaaatgccccttctcttttgcct
gtttgtacttcaagttctcagacttcagcaaatgtaggtgaattacatgacttggacaaa
cgaactgtaaatcctgatgcttctgtatccagtactgtctccagcacacaaactatggta
acccagcaggctgttaaaactgaatcatcaagtacaaatggggcagttgttaaagatgaa
acttcactaacaacattcaattcaaaagctgaagctgctgaaactgcttatatcatgcct
tcgacaagggtcaataccggacagacaaatgattcacactcctctaaaactccacaaaga
caaacggcaccagtgaaaacacgagaccggcagtggtatgatgttggaatttttaagaac
aacagcgctgtggtgagccagttttacttgctgccagaggaaacgctgagcgtctctaat
aagatggaaagtgcggatgtaccagactacagattacttaagaaacaggatctttttcca
ggcacagtgtacaggttcagagttgctgcaattaatggctgtggtgttgggcctttcagt
aaagtcagtgaattcaagacttgcattccgggttttcctggagctccttcaacagtcaaa
attaccaagagtgtagactgtattcatctttcttgggagcctcctgcttcaccctctgga
aatattttagaatattctgcctacttagcaatccgttccacacagttacaggaaaatcca
agtcagcttgtatttatgagaatatactgtggtctgaaaacatcgtgtatagtgactgct
gcccagctttcaaatgctcatgttgattacacttcccgacctgcaatagtgttcagaatt
tctgcaaagaatgagagaggatatggaccagccacgcaagttcgatggcttcaaggtaaa
gtcagtgtcagttgcagcatttcagtgggctgtagctgtggaggaggaaacggtgtgttg
agtctctag
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