Phalacrocorax aristotelis (European shag): 142048458
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Entry
142048458 CDS
T11493
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142048458 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142048458 (VPS45)
Membrane trafficking [BR:
parx04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142048458 (VPS45)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
142048458
NCBI-ProteinID:
XP_074931477
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All DBs
Position
25:complement(2705879..2735019)
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AA seq
630 aa
AA seq
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MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETTGIVSMVYTQSEILQKEVYLFERLDSANR
EAMKHLKAICFLRPTKDNVELLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SESAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACQ
NDHSSALQNVRRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMTDLKNRGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRTNPGVRVVLGGTTIHNT
KRISGSEQEQDTEPSPPDSLTLLLTAACSLPASTFFPSAVGQQQPPAADLRLTIIFLFEK
QFTFSVVSLNVLPVGFCVEPLLWHAAEPFT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctcgccgtcaagcagtacgtgtccaagatgatcgaggacagcgggccg
ggcatgaaggtgctcctcatggaccgggagacgaccggcatcgtgagcatggtgtacacg
cagtccgagatcctgcagaaggaggtgtacctcttcgagcgcctcgattccgccaacagg
gaggcgatgaagcacctgaaggccatctgcttcctccggcccaccaaggacaacgtggag
ctcctcattcaggagctgcggaggccaaagtacagcatctattttatttatttcagtaac
gtgatcagtaagagcgatgtcaagtcactggctgaggctgacgaacaggaggttgtggca
gaagttcaggagttctacggcgattacatcgcagtgaatccacacgttttttctctcaac
ctcttgggctgctgccagggtcgcagctgggatccggctcagctgtccaggacaactcaa
gggctgactgctctgcttttgtctctgaagaagtgccccatgattcggtaccagctctct
tctgagtcagcgaagaggcttgctgaatgcgtgaagcaagtaatcactaaagagtatgag
ctgtttgactttcggcgcactgaggttcctcctttacttctgattctggaccggtccgac
gatgccatcactccgcttctgaaccagtggacgtaccaggctatggttcacgaattgctg
gggattaacaacaaccgcatcgacctctctcgggtaccggggataagcaaggatctccgc
gaggtggtcctgtctgccgagaacgacgagttctacgccaacaacatgtacctgaacttt
gcggagattggcagtaacatcaagaatcttatggaggatttccagcggaggaaacctaag
gagcagcagaagctggaatccatagcagatatgaaggcatttgtggagaattacccgcag
ttcaagaagatgtcaggcacggtatcgaagcacgtgacggtggtgggagagctctctcga
ctggttggtgagcggaacctgctggaggtgtccgaagtggagcaggagctggcctgccag
aatgaccattccagtgctctgcagaacgtgcgtcgcctcctgcagaaccccaaggtgacg
gagtttgatgctgcccggctggtgatgctttatgccctgcactacgagcggcacagcagc
aacagcctgccagggctgatgacagatctcaagaacaggggtgtgtcagagaaataccga
aagctggtgtctgccgttgtggagtatggagggaagcgggtccgaggcagtgacctattc
agtcccaaggatgctgtagccatcaccaagcagttcctcaaaggactgaagggtgtggag
aatgtgtatacgcagcaccagcctctccttcaagaaacactagatcagctcatcaaagga
aaactcaaggacagccagtacccctacctgggtcccaacacgctccgtgacaggccccaa
gacattatcgtgttcatcattggaggggcaacttacgaagaggcgctgaccgtctataac
cttaaccgcaccaacccgggggtccgggtcgtgctaggtgggaccacaatccacaacaca
aagaggatctcaggatctgaacaagagcaagacacagagcccagccctccggactccctg
acactgctgttaaccgctgcatgctcgctgcctgcttcgactttttttccctctgcagtt
ggccaacagcagcccccggcagctgatctccgcctgacaataatttttctctttgagaag
cagttcaccttctcagttgtgtctctgaatgtgttgcctgttggtttttgtgtggagccg
ttgctctggcatgcggctgagccattcacttga
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