Phalacrocorax aristotelis (European shag): 142048861
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Entry
142048861 CDS
T11493
Symbol
COLGALT1
Name
(RefSeq) LOW QUALITY PROTEIN: procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx00310
Lysine degradation
parx00514
Other types of O-glycan biosynthesis
parx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
142048861 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
142048861 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
parx01003
]
142048861 (COLGALT1)
Enzymes [BR:
parx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
142048861 (COLGALT1)
Glycosyltransferases [BR:
parx01003
]
O-Glycan biosynthesis
O-linked Gal type
142048861 (COLGALT1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glycos_transf_2
Anp1
Motif
Other DBs
NCBI-GeneID:
142048861
NCBI-ProteinID:
XP_074932222
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All DBs
Position
28:1257237..1266649
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AA seq
328 aa
AA seq
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MAAARPWPLLLLALAAGPGPAGGYFPEERWSPESPLRPPRVAVALLARNAAHALPATLGA
LERLRHPKERTALWVAVDHSVDNTTALLREWLGRVRGLYHRVEWRPLEEPRSYPDEEGPK
HWPPSRYEHVMKLRQAALDSARAIWADYLLFLDADNVLTNPDTLGLLMAENKTVVAPMLD
SRAAYSNFWCGMTAQGYYRRTPAYLPIRRRERRGCFAVPMVHSTFLLDLRKEASRALAFY
PPRPDYTWAFDDIIVFAFSCRQAEVQMFVCNREVFGFLPVPLRSHSTLRDEAESFLHVQL
EIMVKHPPAEPSPHVWVPPKVPDKIGLR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggccgtggccgctgctgctgctggcgctggcggcggggccgggcccg
gcgggcgggtacttccccgaggagcgctggagccccgagtcgccgctgcggccgccgcgc
gtggccgtggcgctgctggcgcggaacgcggcccacgcgctgcccgccacgctcggggcg
ctcgagcggctgcggcaccccaaggagcgcacggcgctctgggtggccgtggatcacagc
gtggacaacacgacggcgctgctgcgggagtggctggggcgggtgcgggggctctaccac
cgcgtggagtggcggcccctcgaggagccgcggtcctaccccgacgaggagggtcccaag
cactggcccccgtcccgctacgagcacgtgatgaagctgcggcaggcggcgctggactcc
gcccgcgccatctgggccgactacctgctgttcctggacgccgacaacgtcctgaccaac
cccgacaccctggggctgctgatggccgagaacaagacggtggtggcgcccatgctcgac
tcgcgcgccgcctactccaacttctggtgcgggatgacggcgcagggttactaccggcgg
acgccggcctacctgccgatccgaaggcgggagcgccggggctgcttcgccgtgcccatg
gtgcactccaccttcctgctggacctgcgcaaggaggcgtcccgggcgctcgccttctac
ccgccccgccccgactacacctgggccttcgacgacatcatcgtcttcgccttctcctgc
cggcaggcggaagtgcagatgttcgtgtgtaaccgggaggtgttcggtttcctgccggtg
ccgctgcgctcccacagcaccctgcgggacgaggccgagagcttcctgcacgtccagctc
gagatcatggtgaagcaccccccagcggagccctccccccacgtctgggtgccccccaag
gtccccgacaagattgggcttcgatga
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