Phalacrocorax aristotelis (European shag): 142048863
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Entry
142048863 CDS
T11493
Symbol
TNPO2
Name
(RefSeq) transportin-2
KO
K18727
transportin-2
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142048863 (TNPO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142048863 (TNPO2)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
142048863 (TNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
Arm
HEAT_2
TOR1L1_N
TPR_IPO5
Cnd1
HEAT_EF3_N
IBN_N
Vac14_Fab1_bd
TPR_DNAAF5
PDS5
HEAT_MROH2B_C
Adaptin_N
MMS19_C
Ltn1_1st
HEAT_GCN1_C
TPR_CAND1
INTS7_N
HEAT_GCN1_C_2
SCD
Dopey_N
PIK3R4-like_middle
TPR_TTI1_C
UNC45-central
CandA_N
RTP1_C1
TPR_IPO11
DUF2573
DUF3689
Motif
Other DBs
NCBI-GeneID:
142048863
NCBI-ProteinID:
XP_074932224
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Position
28:625529..633096
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AA seq
887 aa
AA seq
DB search
MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPQPVAEFIKQECLNNIGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNVMIPKFLQF
FKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDSDENVALEACEFWLTLAEQPICKEVLTSHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERPQDPDDAED
EDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKESGILVLGA
IAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDMYLKPLMT
ELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYD
AIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLP
YCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGCHVEQLV
ARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFIS
VCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCP
QEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWV
SPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKDRLAAFYGV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggactggcagccggacgagcagggcctgcagcaggtcctgcagctgctgaaggactcg
cagtcccccaacacggccacgcagcgcatcgtgcaggataagctgaagcagctgaatcaa
ttccccgacttcaacaactacctgatctttgtgctgacgcggctcaagtctgaagatgag
cccacgcggtcgctcagcggcctgatcttgaagaacaacgtcaaggcgcactaccagagc
ttcccccagcccgtggccgagttcatcaagcaggagtgtctcaacaacatcggggatgcg
tcttccctcatccgggccaccatcggcatcctcatcaccaccatcgcctccaagggggag
ctgcagatgtggccggagctgctgccgcagctctgcaacctgctcaactctgaggactac
aacacgtgcgagggggcatttggggccctgcagaagatctgtgaagactcctccgagctc
ctggacagtgacgcgctcaaccggcccctcaacgtcatgatccccaaattcctccagttc
ttcaagcactgcagccccaagatcaggtcccatgccatcgcctgcgtcaaccagttcatc
atggaccgggctcaggcactgatggagaacattgacaccttcattgagcacctcttcgct
ctggcggtggatgaggaccccgaggtacggaagaatgtgtgccgcgcactggtgatgctg
ctggaggtccgcatcgaccgcctcatcccccacatgcacagcatcatccagtacatgctg
cagcggacgcaggacagcgacgagaacgtggcactggaggcctgtgagttctggctgacg
ctggccgagcagcccatctgcaaggaggtgctgacctcccacctggtgcagctcatccct
atcctggtgaatggcatgaagtactcggagattgacatcatcctactcaagggggatgtg
gaggaggatgaggccattcctgacagcgagcaggacatcaagccccgcttccacaagtcc
cgcacggtgacactgcagcatgaggaggagcggccacaggaccccgacgatgcggaggat
gaggatgatgatgacacactgtcagactggaacctgaggaagtgctcggctgccgcgctg
gacgtcctggccaacgtcttccgggaagagctgctgccccacctcctcccactgctcaag
gagctcctcttccaccccgagtgggtcatcaaggagtcaggcatccttgtcctgggggcc
attgcagaaggctgcatgcagggcatggtgccctacctgccggagctgatccctcacctc
atccaatgcctatcggacaagaaggcgctggtgcgctccatcgcctgctggaccctgagc
cgctacgcccactgggtggtcagccagccccctgacatgtacctcaagcccctcatgact
gagctgctcaaacgcatccttgacagcaacaagcgggtgcaggaggcggcctgcagcgcc
tttgccacgctggaggaggaggcctgcacggagctggtgccgtacctcagcttcatcctg
gacacgctggtctttgccttcggcaagtaccagcacaaaaacctgctgatcctctatgac
gctatcgggaccctcgccgactctgtgggccaccacctcaaccagccggaatacatccag
aagctgatgcctccgctcatccagaagtggaacgagctgaaggacgaggacaaggacctc
ttcccgctgctggagtgcctgtcctcggtggccactgccctgcagagcggtttcttgccc
tactgcgagcccgtgtaccagcgctgcgtcaccctggtccagaagacgctggctcaggcc
atgatgtataaccagcacccggagcagtatgaggcccccgacaaagacttcatgattgta
gccctggacctgctgagtggtttggccgagggtcttggctgccacgtggagcagctggtg
gctcgcagcaacatcatgacactgctcttccagtgcatgcaggacaccatgcctgaagtg
cgacagagctccttcgccctcctgggcgacctcaccaaggcctgctttgtgcacgtcaaa
ccctgcatcgctgagttcatgcccattctgggcaccaacctcaaccccgagttcatctcc
gtctgcaacaatgcgacctgggccatcggggagatctgcatgcagatgggggcggagatg
cagccctacgtccagatggtcctgaacaacctggtggagatcatcaaccgccccaacacc
cccaaaaccctcctggagaacacagccatcaccatcgggcgcctgggcttcgtctgccca
caggaggtggcccccatgctgcagcaattcatccggccctggtgcacgtccctccgtaac
atccgggacaacgaggagaaagactcggctttccgtggcatttgtgtgatgatcggggtg
aaccctggaggggtcgtgcaggacttcatattcttctgtgacgctgtcgcgtcctgggtg
agccctaaggatgacctgcgggacatgttctataagatcctccacggcttcaaggaccag
gtgggtgaggagaactggcagcagttttcggagcagttcccacctttgctcaaggaccgg
ctggcagcattttatggggtctag
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