Phalacrocorax aristotelis (European shag): 142048901
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Entry
142048901 CDS
T11493
Symbol
SMARCA4
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142048901 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142048901 (SMARCA4)
03036 Chromosome and associated proteins [BR:
parx03036
]
142048901 (SMARCA4)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142048901 (SMARCA4)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
142048901 (SMARCA4)
Chromatin remodeling factors
BAF complex
142048901 (SMARCA4)
PBAF complex
142048901 (SMARCA4)
GBAF(ncBAF) complex
142048901 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
142048901
NCBI-ProteinID:
XP_074932301
LinkDB
All DBs
Position
28:complement(715499..746387)
Genome browser
AA seq
1646 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQG
PGGYAQDNMHQMHKPMDSMHEKGITDDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPVQGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSA
GSGSGSASFPHTASTLCLNAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDADGGSATPTTSTRSREKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEESEGEDSEEEEEGEEEGSESEARSVKVKIKLGRKEKAQERLKGRRRTSRGSR
AKPVVSDDDSDEEQEEDRSGSGTEDD
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccggatcctcccatgggaggaacccctcgcccggggccctctccggggccg
ggcccctcgccgggggccatgctgggacccagcccgggaccctctcccggctccgcacac
agcatgatgggccccagccccgggccgccctcggcaggacacccgctgccgccccagggg
ccggggggctacgctcaggacaacatgcatcagatgcacaagcccatggactccatgcac
gagaagggaataaccgacgaccctcgctacggccagatgaaagggatgggaatgcggccc
ggcgggcacgcgggaatgggtccccctccgagcccgatggatcaacactctcaaggttac
ccttctccgctcggcggctccgagcacgcctcgagccccgtcccggctaacggtccctcc
tccggccctcagatgtcctcggggcccgggggagtccccttggacggcaccgacccccag
gcgctggggcagcagaaccggggcccgaccccttttaaccagaaccagctgcaccagctg
agagcgcagatcatggcctacaagatgctggccagggggcagccgctgcccgaccacctt
cagatggcggtgcagggcaagcgccccatgcccggaatgcagcagcaaatgccgacacta
cctccgccctccgtgtccgggacaggaccagtgcaaggaccagtgcaagggcctggaccg
ggaccgacacctccaaactacaacagacctcacggtataggagggcctaacatgccccct
cccggaccctcaggagttcccccaggaatgcctgggcagccccccggcggcccccccaag
ccctggccggaaggaccaatggcaaatgccgcagcccccactagcacacctcagaagctg
attcctccccagcccaccggccggccctcgccggccccgccggccgtgccccccgccgcc
tcgcccgtcatgccgccccagacgcagtccccggggcagccggcccagccagcccccatg
gtgcagctccaccagaagcagaaccgcatcacgcccatccagaaaccccgagggctcgac
ccggtggaaatcctgcaggagagggagtacaggctgcaggctcgcattgctcaccgcatc
caagagctggaaaaccttcctggctccctggctggtgacctgagaaccaaagctaccatt
gaactgaaagcattaaggctgcttaactttcagcgacagctgcgtcaggaagtcgtggtg
tgcatgaggcgagacacggccttggagacggccctgaacgccaaggcgtacaagcgcagc
aagcggcagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcagaagatc
gagcaagagcggaagcgccggcagaagcaccaggaatacctcaacagcatcctccagcac
gctaaagacttcaaggaataccatcgctccgtcacaggcaaaattcaaaagctgaccaag
gcggtggctacgtaccacgccaacacggagcgcgagcagaagaaggagaacgagcggatc
gagaaggagaggatgcgccgcctgatggctgaagatgaggaggggtaccgcaagctcatc
gatcagaagaaggacaagcgcttggcctacctgctgcagcagacggacgagtacgtggcc
aacctgacggagctggtgcggcagcacaaggccgcgcaggtggccaaggagaagaagaag
aagaagaagaagaagaaggcagagaacgcggaagggcaggctccggccatcggaccggac
ggcgagccgctggacgagacgagccaaatgagcgacctccccgtcaaagtgatccacgtg
gagagcggcaagatcctgaccggcaccgacgcgcccaaggcggggcagctggaggcctgg
ctggagatgaaccccggatacgaagtagctccgagatctgacagtgaagaaagtgggtca
gaagaggaggaggaggaggaggaagaggagcagccgcaacctgctcagcccgccctgcct
gtggaggagaagaaaaagatccccgatccagacagcgacgacgtctcggaagtggacgcc
aggcacattatcgagaacgctaagcaagatgtcgatgacgaatacggcgtgtctcaagct
ctggccaggggcctgcagtcgtactacgccgtggcccacgccgtcaccgagagggtggac
aagcagtccacgctgatggtcaacggcgtcctcaagcagtaccagatcaagggtttggag
tggctggtgtcgttgtacaacaacaacctgaacggcatcctggcggacgagatggggctg
ggcaaaaccatccagaccatcgctttaatcacatacctcatggagcacaagcggatcaac
gggcccttcctcatcatcgtacctctctcaactctgtcgaattgggcgtatgagtttgac
aaatgggctccttccgtcgtgaaggtctcctacaagggctctccggcagcaagacgggcg
ttcgtacctcagctccgcagcgggaaattcaacgtcttgctcaccacttacgaatacatc
atcaaagataagcacatcctggccaagatccgctggaagtacatgatcgtggatgagggc
cacaggatgaagaaccaccactgcaagctcacccaggtcctcaacacgcactacgtggcg
ccgcggcgcttgctgctgacggggaccccgctgcagaacaagctccccgagctgtgggcc
ctgctcaatttcctcctgccgaccatcttcaagagctgtagcacgttcgagcagtggttt
aacgctccttttgccatgacgggggagaaggtggacctgaacgaagaggaaaccatcctg
atcattcggcgtttgcacaaggtgctgcgccccttcctgctgcggaggctcaagaaagaa
gtcgaagcgcagctgcctgagaaggtggagtacgtgatcaagtgcgacatgtctgcgctg
cagagggtcctctacaggcacatgcaggccaagggcgtgctgctcaccgacggctccgag
aaggacaaaaagggtaaaggcggtacgaaaaccttaatgaacacgatcatgcagctgcgg
aagatctgcaaccacccctacatgttccagcacatcgaggaatccttttcggagcacttg
ggcttcacgggtggcatcgtgcaagggctggatttgtaccgtgcctcaggcaaattcgag
ctcctggacagaatcctgcccaaactgcgagccaccaaccacaaggtgctgctcttctgc
cagatgacctccctcatgaccatcatggaagattattttgcttatcgcggattcaaatac
ctcaggctggacggaaccactaaagcggaagaccggggcatgttgttaaagactttcaac
gagccaggctccgagtacttcattttcttgctgagcactcgggctggcgggctgggtctg
aacctccagtctgccgatactgtgattatctttgacagcgactggaaccctcaccaggac
ctgcaggcgcaagaccgagcgcaccgcatcgggcagcagaacgaagtgcgcgttctccgg
ctctgcaccgtcaacagcgtggaggagaagatcctcgccgccgccaaatacaagctgaat
gttgatcagaaggttatccaagccggcatgtttgaccagaagtcctcgagccacgagcgc
agagccttcctccaggcgatcttggagcacgaggagcaggacgagaacagatacagcgcg
ggcagcggcagtggcagtgcaagcttcccccacactgcctcaaccctgtgcctgaacgct
gagttggaggaaccacctctaaaggaagaagacgaagtccccgacgacgaaacggtcaac
cagatgattgcgcggcacgaagaggagtttgaccttttcatgcgcatggacctggaccgc
aggcgcgaggaggcgcggaaccccaagcgcaaaccgcgcctgatggaggaggacgagctg
ccctcttggatcatcaaggacgatgccgaggtggagaggctgacgtgcgaggaggaggag
gaaaagatgtttgggcgaggctcgcggcaccgtaaggaggtggactacagcgactcgctg
acggaaaagcagtggctcaaggtatacatggccatcgaggaggggacgctggaggagatc
gaggaggaggtgcgccagaaaaaatcctcccgtaagcgcaagcgggacgcggacgggggc
tccgccactcccaccaccagcacccgcagccgggagaaggacgacgagagcaaaaagcag
aagaagcgcggccggccgccggcggagaagctctccccgaacccgcccaacctcaccaaa
aaaatgaagaagatcgtggacgccgtcatcaagtataaggacagtagcagtggacggcag
ctcagcgaagtcttcatccagctgccgtcccgcaaggagctgccggagtactacgagctc
atccgcaagcccgtcgacttcaagaaaatcaaggagcgtatccgcaaccacaagtaccgg
agcctcaacgacctggagaaggacgttatgctgctgtgccagaacgcgcagaccttcaac
ctcgagggctccctgatctacgaggactccatcgtcctgcagtccgtcttcaccagcgtc
aggcagaaaatcgagaaggaggaggagagcgagggtgaggacagtgaggaggaggaggaa
ggagaagaggaagggtccgaatccgaggcgcgctcggtcaaggtgaagatcaagctgggg
cggaaggagaaggcgcaggagcggctcaagggccgccggcgaacgagccggggctcccgc
gccaagcccgtggtcagcgacgacgacagcgacgaggagcaggaggaggatcgctccggc
agcggcaccgaagacgactga
DBGET
integrated database retrieval system
