Phalacrocorax aristotelis (European shag): 142049187
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Entry
142049187 CDS
T11493
Symbol
SYVN1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04120
Ubiquitin mediated proteolysis
parx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142049187 (SYVN1)
04120 Ubiquitin mediated proteolysis
142049187 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142049187 (SYVN1)
Enzymes [BR:
parx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142049187 (SYVN1)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142049187 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142049187
NCBI-ProteinID:
XP_074932759
LinkDB
All DBs
Position
33:complement(139548..147879)
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AA seq
628 aa
AA seq
DB search
MGFDRAGRAGEMLYTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQ
AFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTL
LLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGAS
VQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMA
FMTIMIKVHTFPLFAIRPMYLAMSLKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNV
CIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQARPPEPPEQ
APPPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGAENPTPSSGAA
PAARPGDAANAGSEAAAAGTVPGLPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELR
AMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGLPRPAAPQPPSAPARPPP
RNPALPRSPGSFSAPAGAAALKPVLPPTTPPPLSQIPPRRRGAEGFTTEEEDEEEDGGEG
SSSLDEPDTAELRRRRLQKLASPPADSH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgatcgggcaggccgagccggggagatgctctacacggcggtggtgatggcg
gggagcctggcgctgacaacagccgtggtggctcacgcctattacctgaagcaccagttc
tatcccaccgtggtttatctcaccaaatccagccccagcatggccgttctctacatccag
gctttcgtgttggtttttcttctggggaaatttatgggaaaggtgtttttcgggcagctg
cgggcggcggagatggagcacctactcgagcgatcgtggtacgccgtgacggagacctgc
ctggccttcaccgtcttcagggatgacttcagccctcgcttcgtcgcccttttcaccctc
ctcctcttcctcaagtgcttccactggttggctgaagaccgggtggactttatggaaagg
agtcccaacatttcttggctcttccatttccgtatcgtctccctgatgttcctcctggga
atcctggatttcctcttcgttaaccacgcgtaccacagcatcctcacgcgaggagcctct
gtccagctcgtcttcggcttcgagtacgccatcctcatgaccatggtgctcaccatcttc
atcaagtacgtcctgcactccatcgacctgcagaacgagaacccttgggacagcaaagcc
gtctacatgctgtacacggagctcttcacgggcttcatcaaagtcctcctctacatggcc
ttcatgaccatcatgatcaaagtccacaccttcccgctcttcgccatccgccccatgtac
ctggcgatgagtttaaagaaagcggtgacggacgccatcatgtcccgccgggccatccgc
aacatgaacacgctctaccccgacgccacgccggaagagctgcaggccatggacaacgtc
tgcatcatctgccgcgaggagatggtgacgggcgccaagcgtttgccttgcaaccacatc
ttccacaccagctgcctgcggtcgtggttccagcgccagcagacgtgtcccacgtgccgc
atggacgttctccgggcttccctcccggcacaagcccgccctcccgagccgccggagcaa
gccccgccgccgccccagaccccccaagttccccaaccccccaactttccccagggaatc
ctcccccccttccccccgggaatgttccccttctggccgccggttggtcccttcccgccc
gttcccggcgttcaaccacccaacggcgccgaaaaccccacgccgagctccggcgccgct
ccggccgccaggcccggtgacgccgccaacgccggctcggaagccgccgcggcggggacg
gtgccgggtcttcctttcccgccgccgtggatgggaatgccgtggccgcccctcttcggc
ttcccgccgatgccggtgccgccggccggctttgccggcttgacggaagaagaacttcga
gccatggagggccacgatcggcaaaacctggaagcgcggttacagtgtctacagaacatc
cacaccctcctcgacgccgccatggtgcagatcaaccaatacctgacggtcctggccacc
atcgggttgccccggcccgcggctccccagcccccctcagcccccgcgagacccccgccg
aggaaccccgccctcccccgctcccccggcagcttttcggcacccgccggcgccgccgcg
ctaaaaccggtgcttccccccaccacccccccacccctttcccagatcccaccgcgccgg
cggggcgccgaaggcttcaccaccgaggaggaagatgaggaagaggacggcggcgaaggc
tcgtcctcgctggacgaacccgacacggcggaactgcgtcgccgccggctacagaaactg
gcgtcgccgccggcggactcgcactga
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