Phalacrocorax aristotelis (European shag): 142049332
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Entry
142049332 CDS
T11493
Symbol
SOX10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142049332 (SOX10)
Transcription factors [BR:
parx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142049332 (SOX10)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
142049332
NCBI-ProteinID:
XP_074933055
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All DBs
Position
1:complement(161511417..161522298)
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AA seq
463 aa
AA seq
DB search
MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSPHLAGSGNGEMGKVKKEQQDSEADDD
KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY
PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQG
EGEGQVEGEAGGAAAIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKT
ELQAGKADAKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHA
GHPGHVGGYAAAAAAGYGLGSALAAASGHSAWISKQHGVSLSSATSTVVDSKAQVKTEGS
APGGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYS
AFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaccaagacctttcggaggtggagatgagcccggtcggctctgaagaccac
cactgcctctcaccaggaccctccatggcatcagacaactccccacaccttgccggctcc
gggaacggggagatggggaaggtcaagaaggaacagcaagactcagaggcggacgatgac
aagttcccggtgtgcatccgcgaggcagtcagccaggtgctgagcggctatgactggacc
ctggtacccatgcccgtccgggtcaatggaagtaacaagagcaaaccccatgtcaaacgg
cccatgaatgccttcatggtctgggcacaggctgcccggaggaaattggctgaccagtac
ccacacctccacaacgctgagctcagtaagaccttggggaagctctggaggctgttgaac
gaaagtgacaagcggccctttatcgaagaggcggagcggctgaggatgcagcacaagaag
gaccatcctgattacaagtaccagccccgccggcggaaaaacggcaaggccacacagggc
gagggtgaaggccaggtggagggggaggctggtggggctgctgccatccaggcccactac
aagaatgcccacctggatcacaggcatcctggcgaggggtcgcccatgtccgatgggcac
ccagaacattcctcaggtcagagccacgggccccccacccctcctaccacccctaagact
gagctgcaggcaggcaaagctgacgccaaacgagaagggcgttccctgggggaaggggga
aagccacacattgacttcggcaatgtggacattggggagatcagccatgaagtgatgtcc
aacatggagaccttcgatgtcaatgaattcgaccaatacctgccacccaatggacatgcc
ggccacccaggccacgttgggggttatgcagcagcggcagctgctggctacggcctcggg
agcgccctggctgcagccagcggacactctgcctggatctccaagcagcatggagtctcc
ttgtccagtgccacctcaacggtggtagactccaaggcccaggtgaaaacagaggggtcc
gcccctggaggccattacaccgatcagccctccacctcacagatagcttacacatccctg
agtctgccccactacggttcggccttcccctccatctccaggccccagtttgactacccg
gaccaccagccctcaggaccctactacagccattccagccaagcctctggcctctactct
gccttctcctatatgggaccttcccaacgtcccctttacactgccatctctgaccctgca
ccctctgtgccacagtcccatagccccacacattgggaacagcccgtgtatacgactctc
tccagaccgtag
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