Phalacrocorax aristotelis (European shag): 142049393
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Entry
142049393 CDS
T11493
Symbol
DCC
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142049393 (DCC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142049393 (DCC)
Cell adhesion molecules [BR:
parx04515
]
Immunoglobulin superfamily
DCC/UNC5 family
142049393 (DCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Ig_Rha78A_N
C2-set_2
Interfer-bind
fn3_SORL1
Fn3_R-PTP-O
Sp38
Protocadherin
FAM176
EphA2_TM
Arylsulfotran_N
Fn3_SaeA_3rd
PRIMA1
TMEM154
Motif
Other DBs
NCBI-GeneID:
142049393
NCBI-ProteinID:
XP_074933177
LinkDB
All DBs
Position
W:complement(2259681..2868292)
Genome browser
AA seq
1427 aa
AA seq
DB search
MENSLGCVWVPKLAFLLFGFTLASLHPRVSGSQIKTFTSLRFLTEPSDAVTMRGSNVLLN
CVADSDQGAPIIKWKKDAVFLNLAVDERRQQLANGSLLIQNIVHSRHHKPDEGLYQCEAS
LEGVGAIISRTAKVMVAGPLRFLSQTESVMAFAGDTILLKCEAVGEPMPVVHWQRNQEDL
FPSPADTRVAILPSGALQISRVQHGDSGIYRCLAKNPASSRTGNDAEVRVLADPALHRQQ
FFLQRPSNVVAMEGKDAVLECCVSGYPPPTFTWLRGDEVLPMRSKKYSLLAGSNLLISNV
TDDDSGTYTCVVTYKNENSSGSAELSVMVPPWFLIRPSNLYAYESMDVEFECAVSGKPVP
TVEWIKNGEVVIPSDYFQIVGGSNLRILGLVKSDEGFYQCVAENEAGNAQASAQLIIPEP
AVPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEVRGSVQTYTVFFSRDGVNRERAVNTS
QSGTLQLTVGNLKPEETYTFRVVAYNEWGPGESSQPVKVATQPELQVPGPVENIRAVSTS
PTSILVSWDPPAYANGPVQGYRLFCTETATGREQNVEVDGLSYRLEGLKKFTEYSLRFLA
YNRYGPGVSTEDVTVTTLSDVPSAMPQNVSLEVVNSRSIKVSWLPPPPGTQNGFITGYKI
RHRKTTRRGEIETLEPNNLWYLFTGLEKGSQYSFQVAAMTVNGTGPPSDWYTAETPENDL
DESQVPDQPSSLHVRPLTTSIVMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIENLEPSSHYVISLKAFNNAGEGVPLYESATTRSMTVPDISTPMLPPVGVQAVALTHD
AVRVIWADNSVPKNQKTTEVRFYTVRWRTSYSTSAKYKSADTTALSHTVIGLKPNTMYEF
SVMVTKGRRSSTWSMTAHATTCEAAPTSAPKDLTVITREGKPRAVIVSWQPPLDANGKIT
AYILFYTLDKNAPIDDWVMESISGDRLTHQIMDLNLDTVYYFRIQARNAKGVGPLSDPIF
FRTLKVEHPDKMANDQGRHGDGSYWPVDTNLIDRSSLNEPPIGQMHPPHGSVTPQKNSNL
LVVIVVTVGVITVVVVVVVAVICTRRSSAQQRKKRATHSAGKRKGSQKDLRPPDLWIHHE
EMEMKNIEKPTGSDPTGRDSPMQSCQDITPVSHSQSETQLGSKSTPQPGPETEDVGSSMS
TLERSLAARRATRAKLMIPMDSQPNNPPVVSAIPVPTLESAQYPGILPSPTCGYPHPQFT
LRPVPFPTLSVDRTFGTGRTVNEGPAAQQPSLLPQTQPEHPNNEDAPSRTIPTACVRPTH
PLRSFANPLLPPPMSAIEPKVPYTPLLSQTGPNLPKAQVKTASLGLAGKARSPLLPVSVP
TAPEVAEEGHKQTEDSANVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagtcttggatgtgtttgggtaccaaagctggcttttctcctcttcgggttt
acgctggcgagccttcatccccgagtctccggttcgcagataaagacttttacatcattg
aggttcttgaccgagccttcagatgccgtcaccatgcgtgggagcaacgtgctgttgaac
tgcgtagcagattcagatcaaggagcccccattattaaatggaagaaagacgcggtcttc
ttaaacctggcagtagatgaaaggaggcagcagctggccaacggatcgctcttgatacag
aacatagtccactccaggcaccacaagccagatgaagggctctaccagtgcgaagcatct
ctagaaggtgttggagcgatcatcagtcggacagctaaggtcatggtagcaggaccactg
aggtttctttcccagacagaatctgtcatggctttcgcaggagacaccatcctgctgaag
tgtgaagctgtcggggagcccatgcccgtggtgcactggcagcgaaaccaggaggacttg
ttcccgagcccggccgacacgcgggtggccatcctgccctccggagctttacagatcagc
agggttcagcacggcgacagcgggatctacaggtgcctggcgaaaaacccagccagttct
cgaactggaaatgatgcagaagtcagagttttggcagatccagctttgcaccgacagcag
tttttccttcagcgaccgtcaaacgtggtggctatggaagggaaggatgctgttctggag
tgctgcgtttctgggtacccccctcccaccttcacgtggctgcgaggagatgaagtcctc
cctatgaggtccaagaagtattcgttgctggctggcagtaacctactcatatcaaacgtg
accgacgacgattcggggacctacacgtgtgtcgtcacctacaaaaacgagaacagcagc
ggctctgcagagctgtcagtgatggttccaccatggtttttaattcgtccttcaaacctt
tatgcctacgagagcatggatgttgagtttgaatgtgccgtgtctgggaagcctgttcct
acggtggagtggatcaagaatggagaagtggtcattcccagcgactattttcagatagtg
ggtggcagcaacttacggattctgggcttggtaaagtcagatgaaggtttttatcagtgt
gtagctgaaaatgaagctggaaacgcacaggccagtgcacagctaatcatcccagagcct
gctgtcccaagttccagtgtcctcccctctgctccccgagatgtggtccctgttttggtc
tccagccgatttgtccgtctcagctggcgcccacccgcagaagtcagaggcagcgtccag
acgtacacggtcttcttctccagggatggcgtcaacagggaacgggcagtcaacacgtct
cagtctgggacacttcaacttaccgtgggcaacctgaagccggaggagacctacaccttc
cgagtggtggcatacaacgagtggggaccaggagagagctcacagcccgtcaaggtcgcc
acgcagccggagctgcaagttcccgggccggtggaaaacatacgggctgtgtctacctca
cctacctcgattctcgtctcctgggacccccctgcctatgctaatggccccgttcaaggc
tacaggctcttctgtacggagacggcaactggaagagagcagaacgtggaggtggatggg
ctctcctaccggctggaggggctgaagaagttcaccgagtacagcctgcgcttcctcgcc
tacaaccgctacggccccggtgtctccaccgaggatgtgacggtcaccacgctttccgat
gtgcccagcgcgatgcctcagaacgtctccttggaagtggttaactccaggagcatcaaa
gttagctggttgcctccaccgccaggtactcaaaatggatttattacgggctataaaatc
cgacatagaaagactacccgcaggggtgagattgaaacactggagccaaacaacctctgg
tacttgttcacaggacttgagaaaggaagccagtacagtttccaggtggctgccatgaca
gtgaacgggacagggcccccctcggactggtacacagcagaaacacccgagaacgatctc
gatgaatctcaggttcctgaccagccaagctctcttcatgtcaggcccttgaccacaagt
atcgtcatgagttggactccgccgctgaacccaaacattgtcgtccgcgggtacatcatc
ggctacggcgtcggcagcccctatgctgagactgtgcgggtggacagtaaacagcgttat
tattccattgaaaatttggagccaagttcccattacgtgatttccttaaaggcctttaac
aacgcaggcgaaggggtgcctctgtacgaaagcgcgaccaccaggtcgatgacagtccca
gatatctccacccccatgctcccaccagtaggtgtccaggctgttgcacttacacatgat
gcagtgagggtcatctgggcagacaactctgtcccaaagaaccaaaagactacggaggtt
cgcttctacacagtccgatggagaacgagctattcgacgagtgcgaagtacaagtcagca
gatacaaccgctctgagtcacaccgtgataggtctgaagccaaacaccatgtacgagttc
tccgtcatggtcaccaaaggtcggcggtccagcacctggagcatgaccgcgcacgccacc
acctgtgaagcagctccaacctctgctcccaaggatttgacagtcattacacgggaaggg
aagccccgggctgttattgtcagctggcagccgccgttagatgccaatggaaaaattact
gcttacatcctcttctatactttggacaagaatgctccgatcgacgactgggttatggag
tccatcagcggcgaccggctcacccaccagatcatggacctcaacctggacaccgtctac
tacttcagaatccaagctcgcaacgccaagggagtggggcccctctccgatcccatcttc
ttccggactctgaaagtcgagcaccctgacaaaatggctaatgaccaaggtcgtcacggg
gacgggtcctactggccggtggacaccaacctgattgacaggagcagtctgaatgagccg
cccatcgggcagatgcaccctccccacggcagcgtcacgccccagaagaacagcaacctc
ctcgtcgtcatcgtcgtcaccgtcggcgtcatcaccgtggtggtggtggtggtggtggcc
gtcatctgcaccaggcgctcctcggcccagcagaggaagaaacgtgcaactcacagcgct
ggtaaaaggaagggcagccagaaggacctgagacccccggatctgtggatacaccacgag
gagatggaaatgaagaacatcgagaagccgacgggctcggaccccacgggaagggactcc
ccgatgcagagctgccaggacatcacccccgtcagccacagccagtcggaaacacagctg
ggcagcaagagcaccccgcagcccggtcctgagacagaagatgtgggaagcagcatgtcc
acgttggagcgctcactggctgcccgcagagccacccgtgccaagctcatgatccccatg
gattcgcaaccaaacaaccctcctgtggtcagcgccattccagtgccaacactagaaagt
gcccagtaccccgggatcctgccgtccccgacctgcggatacccgcacccacagttcacc
cttcggccggtgccgttcccgaccctctctgtggacaggacctttggaacaggaagaact
gtaaacgaagggccagcagcacagcagccgtccttgctaccgcagactcagcctgagcac
cccaacaacgaggacgccccgagcagaaccatccccaccgcctgcgtccgccctacgcac
cctctccgcagctttgccaaccccttgctacctccgcccatgagtgcaatagaaccgaaa
gtcccttacacgccacttctgtctcaaacagggcctaacctccccaaggctcaggttaaa
acagcatccctcggcttggcaggaaaagccaggtcacctctgctgcctgtctcggtgccc
acggccccggaggtcgcggaagagggccacaagcagacggaggactccgcaaacgtttat
gagcaagatgatctgagtgaacagatggccagtttggaggggctaatgaagcaactcaat
gctatcacaggttcagccttctaa
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