Phalacrocorax aristotelis (European shag): 142049454
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Entry
142049454 CDS
T11493
Symbol
DDX17
Name
(RefSeq) putative ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142049454 (DDX17)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142049454 (DDX17)
Spliceosome [BR:
parx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142049454 (DDX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142049454
NCBI-ProteinID:
XP_074933295
LinkDB
All DBs
Position
1:complement(161709612..161730084)
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AA seq
655 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgt
ggaggtcctcttcctccaaagaaatttggtaatccaggggaacgtttacgtaagaaaaaa
tgggatttaaatgaactgcccaagtttgaaaagaatttttacgtggaacatccggaagtg
gctaggcttactccgtatgaagttgaagaattgcgaagaaagaaagagataacaattaga
ggaatggagggctgccccaagcctgtgtttgccttccaccagtgcagctttccacagtat
gtgatggatgccttgatggaccagaacttcacagaacccactccgattcagtgccaaggc
tttccgctagccctcagtggtcgtgatatggtgggcattgcgcagactggctctgggaag
accctagcatacttgctgcctgcaattgttcacatcaaccaccagccatatttggagaga
ggggatggcccaatttgcctggttctagcacctactagagagttggctcagcaagtgcag
caggtggctgatgattatggcaaatgttcaaggctgaagagtacctgcatatacggagga
gcacccaaagggccccaaatcagagatctagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgatttccttgaggcaggaaagaccaaccttcgtcggtgtacgtac
ctggtgctggatgaagcagacaggatgttggacatggggtttgaaccccaaattcgtaaa
attgttgaccagataaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgccgaggacttcctgcaggactatgttcagatcaatgtgggaaat
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggagagtgag
aaagaccacaaactgatacaactgatggaagaaatcatggcagagaaggaaaacaagact
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactatccgaacagctctgaagat
tatgtgcatcgtattggccgtactgcacgtagtaccaacaaaggtactgcctacacgttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccaaaactgatgcagcttgtggaccaccgaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattccgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttccgcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtatccgccccctcccccaccccctcccccgtcccgcaaatga
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