Phalacrocorax aristotelis (European shag): 142049639
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Entry
142049639 CDS
T11493
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142049639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142049639
03036 Chromosome and associated proteins [BR:
parx03036
]
142049639
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142049639
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
142049639
Chromatin remodeling factors
BAF complex
142049639
PBAF complex
142049639
GBAF(ncBAF) complex
142049639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
142049639
NCBI-ProteinID:
XP_074933617
LinkDB
All DBs
Position
W:22131715..22256229
Genome browser
AA seq
1143 aa
AA seq
DB search
MGPPQSPMDQHNQGYMSPHPSPLGAPEHMPSPMSGQGPIPPQMTLSQPGPTIPGDPQVMS
QPNRGPSPFSPVQLHQLRAQILAYKMLARGQSLPENLQLAVQGKRTLPGIQQQQVPAAYS
RQSSIGSHALSGPTAGPGPAPGVLGHIAAMTPKPWTEGQAPDMSVPNTPQKLSVPPPSRR
PSPAPVASQPSAAMPGPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPIEILQEREY
RLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLET
ALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS
VSGKIQKISKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAY
LLQQTDEYVANLTNLVWEHKQAQAAKEKKKKRRRKKKAEENAEGMGSGLGPDGEPIDESS
QMSDLPVKVTHTETGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDD
EEESNRLEADEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHA
IIERVEKQSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLM
EHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLL
TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK
LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLL
RRLKKEVESQLPEKVEYVIKCDMSALQKILYCHMQAKGILLTDGSEKDKKGKGGAKTLMN
TIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLQATNH
RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR
AGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA
AKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEVRQLKKNSKMIQLALGKQL
YNW
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgggcccacctcagagtccaatggaccagcataatcaaggctatatgtctccacaccca
tctccactgggagcaccagaacacatgcccagtccaatgtctggacaaggtccgattcca
ccccagatgactctaagtcagccaggacccacgataccaggagacccacaagttatgagt
caacccaacagaggtccttcacctttcagtcctgtgcagctacatcagctccgagctcag
attctagcatacaaaatgttagctagaggtcagtctttaccagaaaacctccaacttgct
gttcaaggaaagaggaccctgcctggcattcagcagcaacaggttcctgctgcctatagc
aggcaatcaagtattgggtcacatgcattgagtgggcctacagctggcccaggaccagct
ccaggagtacttggacatatagctgccatgacccctaaaccttggacagaaggccaagcc
ccagatatgagtgttcccaatacaccgcaaaagctctctgtaccacctcctagcaggagg
ccttctcctgcccccgttgcttcccagccttctgcagccatgcctgggccctctgtacca
cagcccacacctggacagccttcacctattgtgcagctgcagcaaaaacagaatcgtatc
agccctatccagaaaccacaaggattggatccaattgaaatactccaggaacgtgaatat
aggcttcaggctcgaattgctcacagaatccaagaactggagaacttgcctggctctttg
cctcctgatctgcgaaccaaagctacagtggagttgaaggcacttaggttactgaatttc
cagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacacaacgctagagaca
gccctaaactccaaagcctacaagaggagcaagcgccagactctgagggaggcccgtatg
acagaaaagcttgagaaacagcagaagatagaacaagagaggaaacgtagacagaaacac
caggaatatctgaacagcatattgcagcatgctaaagattttaaagaataccaccggtca
gtgtctgggaaaatacagaaaatttctaaagctgtggcaacttggcatgccaacactgaa
cgtgagcagaaaaaggaaactgagagaattgagaaagaaagaatgagaagactaatggct
gaggatgaagaaggctaccgtaagttgattgaccaaaagaaagatagacgcctagcctac
ttattgcagcagacagacgagtatgtggctaatctgaccaatctggtatgggagcacaaa
caggcacaagcagccaaagagaagaaaaagaagaggagaagaaagaagaaggcagaagaa
aatgcagaaggaatgggatctggtcttggtcctgatggagagcccatagatgagagcagt
cagatgagtgaccttccagtcaaggtgactcacactgaaacaggcaaagttcttcttgga
ccagaagcaccaaaagcaagtcagctcgatgcttggttggaaatgaaccctggctatgaa
gttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggaggaggatgat
gaagaagaatcaaataggttagaagcagatgagaagatacttctggatcctaacagtgag
gaagtttctgagaaagatgctaaacaaatcattgagacagccaaacaagatgtggatgat
gaatacagtatgcaatatagtgctagagggtctcagtcatactacactgttgctcatgca
atcatagagagggtagagaagcagtcttctcttcttattaatggtacactaaaacattat
cagctccagggcctggaatggatggtttccctctataataacaatttgaatggaatttta
gctgatgaaatgggactaggaaaaaccatacagactattgcactcatcacttatctgatg
gaacacaaaagactcaatggcccctatctcatcattgttcccctttcaactttatccaac
tggacatatgagtttgacaaatgggctccttctgtggtgaaaatatcttacaaggggaca
cctgccatgcgtcgctcacttgttcctcagcttcgaagtggaaaatttaatgttctttta
actacttatgagtacataataaaggacaaacatattcttgctaagattcgatggaaatac
atgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgactcaggtcttg
aacactcattatgtggcccctaggaggatactgttgaccgggactccacttcagaacaaa
ttgcctgaactctgggctcttctcaacttcctcctccctaccattttcaagagctgcagc
acctttgaacagtggttcaatgctccatttgccatgactggagaaagggtggacttaaat
gaggaagagactatcctgatcatccgtcgtctccacaaagtgctacgtccgtttttgcta
aggagactgaaaaaagaggttgagtctcaactaccagaaaaggttgaatatgtaatcaaa
tgtgacatgtcagctcttcagaagatcctgtactgccacatgcaagccaagggaatcctt
ctcacagatggttctgagaaagacaagaagggaaaaggtggggcaaaaactcttatgaac
acaatcatgcaattgagaaagatatgcaatcacccgtatatgtttcaacatattgaggaa
tccttcgctgaacatttaggctactcaaatggtgtcatcaatggagctgagctttatcgg
gcttcggggaagtttgaactacttgatcgtattttacctaagttgcaagccactaaccat
cgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaggactattttgca
tttcgaaatttcctttacttacgtcttgacggtacaacaaaatcagaggatcgagctgcc
ctgctgaagaagtttaatgaacctggctcacagtacttcatcttcttgctgagtacaagg
gcaggagggctgggcttgaacctccaggctgctgacactgttataatctttgatagtgat
tggaatcctcaccaggacttgcaggcccaagaccgagctcatcgaattggtcagcagaat
gaggttcgagtcctgcgactgtgcactgtgaacagtgtggaggagaagatactcgctgct
gcaaagtataaactgaatgtagatcaaaaagttattcaggctggaatgtttgatcagaaa
tcttcaagccatgagcggagggcttttctacaggctatattagaacatgaggaagaaaat
gaggtaaggcagttaaaaaaaaattcaaagatgattcagttggcgcttgggaagcagcta
tataactggtag
DBGET
integrated database retrieval system
