KEGG   Phalacrocorax aristotelis (European shag): 142050021
Entry
142050021         CDS       T11493                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
parx  Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:parx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:parx03036]
    142050021 (KDM4C)
Enzymes [BR:parx01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     142050021 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     142050021 (KDM4C)
Chromosome and associated proteins [BR:parx03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    142050021 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF7141 SLX1_C Tudor_5 LBR_tudor
Other DBs
NCBI-GeneID: 142050021
NCBI-ProteinID: XP_074934424
LinkDB
Position
Z:complement(50566942..50827210)
AA seq 1071 aa
MAAVISDSPPNPSCKIMTFRPSMEEFREFNKYLAYMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFKQLANSDKYCTPRYVDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGIEEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWID
YGKSAKLCTCRRDMVTISMDIFVRKFQPDRYHLWKQGKDLYTIDHTKPTPESTPEVKTWL
QRRKKIKNFPKGFQHTRSRSKKLKTPEDKRVSAMVASAEIIVTEAATDGFKVSEEPGKEV
RLVHTGVPSGEEENSSRMQLDQHLLDNVKVAGSIHSDSFSSPVPILEKTKMEDEDRADSS
HPLLTFEDSVAHLPTSDSCRKEENLKSQNQSVSSILYHESEEHASEAENPDKEENILIED
DISDLESCGSSLEHGGMPIVKKNEDDGMETSSSAEVERKKISKSWRHPLNKPPTRSPMTV
VKQQATSDEELPETALIEEKVQEPESWARPLVYLWQTRVPNFNAEKEYNAACAKKEPHCA
ICTLLMPYYKPDNHDEESPPLREVNSAETLMAENEKTKPLIPEMCFIYSEENTENYLSNA
FIEEDGTSLLISCAKCCVRVHASCYGVPSHEIHNEWLCSRCRKEAWTAECCLCNLRGGAL
KETTDKKWAHVICAIAIPEVRFGNVSERTPIDTSRIPLQRLKLRCIFCRQRIKKISGACI
QCSYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRAKACEKAITVGQTV
ITKHRNTRYYSCRVIGVTSQLFYEVMFDDGSFSLDTFPEDIVSRDCLRLGPPAEGEVVQV
KWPDGKLYGAKYLGTNTAHMYQVEFEDGSQIVMKREEIYTLDEELPKRVKARFSTASDMR
FEDTFYGAHVIMGEKKRQRVLSSRFRNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggctgctgtcatctcagatagtcctccaaacccaagctgcaaaatcatgacttttagg
ccttcgatggaggaattcagggagttcaacaaatacttagcatacatggaatcacaaggt
gctcacagggctggagttgcaaaggttatcccaccaaaggagtggaagccaagaaaacat
tacgatgatattgaagatttggtgattcctgctccaattcaacagatggtcactggccag
tcaggactcttcacacagtacaacattcagaaaaagccaatgacagtgaaggagttcaaa
cagctggccaacagtgacaaatactgcaccccaagatacgtagattatgaagatctggaa
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggc
agcatttatgatgaaggtatcgaagaatggaatattgcccatcttaatactatattggat
gttgtaggagaagactgtggaatttctatcgagggtgtgaatacaccgtatctatatttt
ggcatgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaat
tatctccattttggggagccaaagtcctggtatgctattcctccagagcatgggaaacgg
cttgaaagactagctcaagggttcttcccgagcagctctcaaggatgtgatgcttttctt
cgccacaagatgactctgatttctccatcaatattgaaaaaatatggaattccttttgac
aaggttacacaagaggcaggagaatttatgatcactttcccatatggatatcatgcagga
tttaaccacggttttaactgtgcagagtcaacaaactttgcctctatccgatggattgat
tatggaaaatctgcaaagttgtgcacttgcaggagagacatggtgacaatatccatggac
atctttgtgaggaagtttcaaccagacagataccacctgtggaaacaaggcaaggattta
tacaccattgatcatacaaaaccaactcctgaatcaacacctgaagtaaagacctggcta
cagaggagaaagaaaataaaaaactttcctaagggcttccagcacaccagatctcgatct
aaaaagcttaaaactccagaggacaagcgagtatctgcaatggtagctagtgcagaaatc
atagtgactgaagcagctactgatggcttcaaggtcagtgaagaacctgggaaagaagtg
agactggtacacactggagtgccttccggggaagaagaaaacagtagtagaatgcagctg
gatcaacatttattggataatgtcaaggttgcaggaagcatccattcagactcattttca
agccctgttcccatactggagaaaacgaaaatggaagatgaggacagggcagattccagt
catcctctcttgacatttgaagattctgtggcccacctgcccacttctgatagctgtaga
aaagaagagaatttgaaatctcagaatcagtctgtttcatcaatactataccatgagtca
gaggaacatgcttctgaagcagaaaacccagataaagaggaaaacattttgatagaggat
gatatcagcgacctagaaagctgtggaagtagcttggaacatggaggaatgcccattgta
aaaaaaaatgaagatgatggcatggaaacatccagttcagcagaagttgaaaggaagaaa
atatctaagagttggcgtcatccactaaataagcccccaactaggtctccaatgactgtg
gttaagcagcaagcaactagcgatgaagaactgcctgagactgccttaattgaagagaaa
gttcaagagccagagtcatgggccaggcctctggtctatctttggcagacaagagtaccc
aatttcaatgctgaaaaagagtacaacgcagcttgtgcaaaaaaggaaccacactgtgcc
atttgtactcttcttatgccatattacaagccagacaatcatgatgaagaaagtcctcct
ttaagggaagtgaactcagcagaaacattaatggctgaaaatgaaaagactaaacctctt
attccagagatgtgttttatttatagtgaggaaaacactgaaaactacctatcaaatgcc
tttatcgaagaagatggaacaagtcttctgatttcctgtgcgaagtgttgtgtacgggtt
catgcaagttgctatggtgttccttctcatgaaatccataatgaatggttgtgttctcga
tgcagaaaagaagcctggacagccgaatgttgtctctgcaatttgagaggtggtgcatta
aaggaaactactgacaagaagtgggcacatgtaatatgtgcaattgccatcccagaagtc
agatttggtaatgtctcagaacgtacaccgatagacactagcagaatacctttgcaaaga
ttaaaattgagatgtatcttctgcagacagagaattaagaaaatctctggtgcctgcatt
cagtgttcatatggacgctgcccagcctccttccacgttacctgtgcccatgctgctgga
gtgctaatggaacctgatgactggccgtatgttgtctacatcacatgtttcaggcacaag
atcaaccaaaatgtgagagctaaagcatgtgagaaggccattacagttgggcagacagtc
atcacgaaacataggaatacacgatactatagctgcagagtcataggagtgacatctcaa
cttttctatgaagtcatgtttgatgatggatctttcagtctggatacttttcctgaagac
attgttagcagagactgcctaaggcttggcccacctgcagagggagaggttgtccaagtg
aaatggcctgatggaaaactgtatggtgcaaagtatctggggacaaacacagctcacatg
tatcaggttgagtttgaagatggttctcaaatagtaatgaagagagaagagatctataca
ctagatgaagagcttcctaagagagtaaaagcacgtttttctacagcctctgacatgaga
tttgaagacacattttatggagcacatgtaatcatgggagagaagaagaggcagagagtg
ttgagttcccgctttaggaacgaatatgtggatgatccaggataccgcaccttcttaaaa
agctcattccagaagaaatgccagaaggggctgtaa

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