Phalacrocorax aristotelis (European shag): 142050257
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Entry
142050257 CDS
T11493
Symbol
THBS4
Name
(RefSeq) thrombospondin-4 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04145
Phagosome
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04518
Integrin signaling
parx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142050257 (THBS4)
04518 Integrin signaling
142050257 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142050257 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142050257 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142050257 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142050257 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142050257 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
parx00536
]
142050257 (THBS4)
Membrane trafficking [BR:
parx04131
]
Endocytosis
Phagocytosis
Opsonins
142050257 (THBS4)
Exosome [BR:
parx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142050257 (THBS4)
Exosomal proteins of colorectal cancer cells
142050257 (THBS4)
Exosomal proteins of bladder cancer cells
142050257 (THBS4)
Glycosaminoglycan binding proteins [BR:
parx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142050257 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
142050257
NCBI-ProteinID:
XP_074934830
LinkDB
All DBs
Position
Z:57182788..57223822
Genome browser
AA seq
949 aa
AA seq
DB search
MGWERGAVLLLLPLALQLCPGRAAPPAPRVFDLLPYSNKRVVVNVLQQAFGDPMLNDVYL
LSTFKLQPKSTATIFGLYSSADNSKYFEFMVMGRMNKVALRYLKSDGRLNSVILSNIQLA
DGKPHAVILWLGGLQQGSSTVEFYLDCLQVGAIQDLPKPFSVLSQRSAAVELHTFQEKPQ
DTLDELKLVTGGTLAQAGNLQDCFLQQIEPVPQYTGDFNRQLMGQMMQMNQILGDVKDLL
RQQVKETTFLRNTIAECQACGLGTVNFPTQLPRRSKPKCEVNSCFRGVRCVETAEGFQCG
PCPEGLTGNGVTCSDIDECRYNPCFPGVRCVNTAPGFRCETCPPGYTGQTVQGIGLSYAK
SNKQVCLDIDECQAGGLGPCVPNSHCINTLGSYRCGQCKPGYTGDQARGCQAERSCRNRA
LNPCSVHARCIEERRGECGIGWAGDGYICGKDVDIDGYPNEELSCSAENCRKDNCRFVPN
SGQEDADGDGIGDACDDDADGDGIPNEQDNCVLAPNVNQRNGDQDIFGDACDNCRNVLNN
DQRDTDGDGKGDACDDDMDGDGIKNLLDNCQRIPNQDQEDKDNDGVGDACDSCPTISNPN
QSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTIINSSQLDTDKDGLGDECDEDDDNDGI
PDLLPPGPDNCRLVPNPGQEDDNGDGVGDICESDFDQDTVIDQIDVCPENAEITLTDFRA
YQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTD
DDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNS
LWHTGDTSDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVADSGVTI
DTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQFGVGDI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggagcgcggcgccgtgctgctgctcctgccgctcgccctccagctctgcccc
ggccgcgccgccccgcccgccccccgagtttttgatcttcttccatattccaacaagaga
gtggtagtgaacgtcttgcaacaagcatttggggaccctatgctgaatgatgtgtacttg
ctctcaacattcaaactgcagccgaagagtacagctaccatatttggcctatattcatca
gctgacaacagcaagtattttgaatttatggtaatgggacggatgaataaagtggcgctg
cgctatctgaagagtgatgggaggctgaattcggtgatcttaagcaacatccagctggct
gatgggaaaccccatgctgtcatcttgtggctgggtggcctgcagcaggggtcaagcaca
gtagagttttacctggactgcctgcaagtaggtgccattcaggacctgccaaaaccattt
tcagtgctgtctcagaggtcggcggcagtagagttgcacactttccaggagaagccacag
gatacgctagatgagctgaagctggtaactggaggaacacttgcccaagcggggaacctg
caggattgttttcttcaacaaattgaacctgttcctcagtacactggtgattttaatagg
cagctgatgggtcagatgatgcagatgaaccaaatactgggagatgtgaaagaccttctc
agacaacaggtcaaagaaacaacttttctgagaaataccatagctgagtgccaagcatgt
ggtttgggaactgtgaattttccaactcagcttcctaggcgcagtaaacccaaatgtgaa
gttaattcctgcttcaggggagtcaggtgcgtggagacagcagagggatttcagtgtggc
ccctgccctgaagggctcacaggaaatggagttacctgctcagatattgatgagtgtcgt
tacaacccttgcttccctggagtgcgatgtgtaaacactgctccaggtttccgatgtgag
acctgtcccccaggatatacaggacaaaccgtgcaagggataggactcagctatgccaag
agcaataagcaggtctgcttagatattgatgaatgtcaggctggtggacttggaccctgt
gttccaaattcccattgcataaacactttggggtcttaccgatgtggacagtgcaaacca
ggatatactggagaccaagccaggggatgccaggctgagaggagctgcagaaatcgagcc
ctcaatccatgcagtgtccatgcccgttgtattgaggagaggagaggagagtgtggcatt
ggttgggctggtgatggttatatttgcggaaaagatgttgacattgatggctaccctaat
gaagaactctcatgctctgctgaaaactgcagaaaggacaattgcagatttgtcccaaac
tctggacaagaagacgctgatggtgatgggattggagatgcctgtgacgacgatgcggat
ggagatggcattcccaatgagcaggataactgtgtcttggctcccaatgttaaccagaga
aatggtgaccaagatatctttggagatgcttgtgacaactgccgcaatgtcctgaataat
gaccagagggacacagatggtgatgggaaaggagatgcttgtgatgatgacatggatgga
gatggtattaagaaccttttggataattgtcagaggatacccaaccaagaccaggaggac
aaggataacgatggtgttggagatgcctgtgacagctgcccaacaatcagcaacccaaac
cagtcagatgttgacaatgacctggttggagattcctgcgataccaatcaggacagtgat
ggagatgggcaccaggacagcacagacaactgccccaccattattaacagctcccagctt
gatacagataaggatgggctgggtgatgagtgtgatgaggatgatgataatgatggcatt
cctgacctcttgcccccaggccctgacaactgcagactggtccccaacccagggcaggaa
gatgataatggtgacggggtcggggatatctgtgagtctgattttgaccaggatacagtg
attgatcagatcgatgtgtgccctgagaacgcagagatcaccttgacagacttcagggcc
tatcagacagtcgtgctggacccagagggggatgcgcagattgatcccaactgggtggtt
ctgaaccagggcatggaaattgtgcagactatgaacagtgatcctggccttgctgttggt
tacacagcttttaacggcgttgactttgagggcacttttcatgtgaacaccgtgacagat
gatgactacgctggctttatttttggttatcaagacagctctagcttttatgtggtaatg
tggaaacagactgaacagacatactggcaagcgactcctttcagagctgttgcagagccc
ggcattcagctaaaggctgtgaaatccaagacaggccctggtgagcacctccgcaactcc
ctctggcacacgggggacaccagtgatcaggtcaggctgctatggaaggacccccgaaat
gtagggtggaaagacaaagtctcctaccgctggttcttgcagcacagaccccagattggt
tatatcagggcaagattttatgaaggttctgacctagtggcagactctggtgtaactata
gacaccacaatgcgtggaggacggcttggagttttctgcttctctcaggaaaacattatt
tggtccaacctgaaatatcgctgcaatgacaccatcccagaggactttcaagaatttcaa
gctcagcaatttggtgttggtgatatttaa
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