Phalacrocorax aristotelis (European shag): 142050540
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Entry
142050540 CDS
T11493
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
142050540 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142050540 (DMXL1)
Membrane trafficking [BR:
parx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142050540 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
142050540 (DMXL1)
RAVE complex
142050540 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
142050540
NCBI-ProteinID:
XP_074935364
LinkDB
All DBs
Position
Z:15509878..15597407
Genome browser
AA seq
3045 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVICIFEPVNLLKQNSGHDNTLHYQWQKNAQILLESLAHNLTW
DPTGTRLLTGSSCLQLWSSVSLENPSDNDNTERTDIGLGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNTDSWRSAIAPPGEGPEKQAKEVDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGHNNWSEAVNFTSNFKRN
TSSKEKVQNALELSLRHFRRGRRRSGAVVAHTGYGPHQQDPHEVHRNIPPHANALCHFHI
AASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKKSFEH
HSPETNTEESNQMDGRSEDDVDENGDEQKGNQEKKELGDEKTIPNSSLVPLSPNIIDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDAENAKQANDSLKSQESPVRLQSRGNEDVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
SNQEKEISEKNKLSESGNQQNGFSEKFYLIVIEYTQNHSLLHMWHLHLKSIPVSVDEKID
SNTPEAATQTEELSSSPDPEKIQSPFTQKYQACRANLQSTSWLTLSSRMVYSQELSLPEG
VEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVTTESSASSMPECSARS
DVTYVWEEWPLLIEDGLLSSSAINVPGRPTEVSCAHTNRLAVAYKQVTSKNSNPSQNFVM
HVGIFECESTGGGSWILEQTLHLDEIGTMLGSGVSIDSNLVAYNQQDISLSHGGNIMPST
KHLVHLDWMSREDGSHILTVGIGSKLYMFGQVSGKMQEQNGKEITTVSHSGSMKATTLSR
FVLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVSTDSCS
GSMPCTASLMKQSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSACDLSTEMEDSGLFEAA
HTLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDRRLRSLT
ISASGSTARDPKTFSKSETTDYIEIDSVPPLPLYALLAADDDSSHSCSEKANNQNSQNKK
DMPNDNYEDLFQSTIISTDELVTFDAEEESSKPKVIDLSQYSPTYFGPEHAQVLSRHLLH
SSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRLHTFLTT
SLPPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGIGWWVRN
IHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTE
DRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLALVISRLYESE
FEVSSTYKSVLQKRVLGSVFPGKESSGNMHCDPFLRSMAYWILEDYSKALDTLIKHSVEG
EGDEGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINMGER
RLFFTTAYAHLKAGCPMLALEVLSKMPKVVKKSKSFCRSPSLMDTSKDFSPSSPVRELET
KDRSSSVDWSQPVFNGLGSPSDCSSGKHSSSTLSFDWSQPSVVFQDEQLKLQSDSDESDE
SEDSSLVMKELKPPKKTEKLPETSSSYTESFSVVDDKDILSPSEDIISAQLKFRACLKIL
TVELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYSVEVEERQSGINVMPEEVPLH
ENTEDLAEQQKNMLQKEDFQKRCQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILL
LQESQQEQSMQKPSSPLPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLDS
PPHPDTQNNKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSLR
TTGLEETATPNTSPAQWPGITSLICLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLAT
HSSDELYRIMAHPLNNKMWSAIFGGGAHTPSRGQLQLKTKTDDGEKQQKRYKLSSKISPK
ESSHSPALPLVDQESPSYKERFIPPELSIWDYFIAKPFLPSQSAVEYDSEESQESGEDEE
GIGGDGFASNSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKTFYPLAGHDLSELPVSSPIC
HAVLKTLQRWEQVLLRRLELYGGPPQHYISVHASEDALAAGPALLRHKTLLEPTNTPFRS
NSHVALSVKRLWQYLVKQEEVQETFIRNIFTKKRCINESLEEHNETMKNSVVVEPIVNKI
ETDLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSSILATQIYTWVD
DDVEVEHKGADDFLVIHARDDLVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMLKK
AINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKF
GIVDADGYISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGLSSDN
RNICLWDTLVSPTNSLVHAFICHDSGATVLAYAPKHQLLLSGGRKGFTCIIDLRQKQQQQ
LLQSHDSPVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTFINEHARQSIFRNIGTG
VMQIETGPANHIFSCGADGTVKMRILADRFSPLNDMLKNDVKLMI
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaccaggtgctgacgggggccgtgaaccccggggacaactgcttctccgtg
gggagcctgcatgaccagcccttcacggcatatgcatcaggatgtgatattgtggtactg
gggactgactttgaaagattacagataatccctggagcaaaacatggaaacatccaggtg
ggatgtgtggactgttcaatgcaacaggggaagattgcagcttcttacggaaatgtgatt
tgtatctttgagccagttaacctcttgaagcagaacagcggtcatgataatacgttgcat
tatcagtggcagaagaatgctcaaatcttgctggaatctctagcacataatctaacatgg
gatcccacaggcactcggcttttgactggttccagttgtcttcagctttggtccagtgtt
tctttagaaaacccttctgacaatgacaatactgaaagaacagatattggacttggagaa
tggaggtgcatctggcaatgcaaaactgcttctcaagtttgtttaatgaaattctcacca
gatggggagttttttgctactgctggaaaggatgattgtcttgtgaaggtgtggtacaat
acagacagctggcgatcagccatagcaccacctggcgaaggtccagaaaaacaagcaaaa
gaagttgatttttcatttgtttatttggctcatcctcgatcagtaaatgcattttcatgg
aggaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagcctattgtat
ggtggaggacacaacaattggagtgaagcagtgaacttcacaagcaacttcaagagaaat
acttcaagtaaggaaaaagtgcaaaatgctttagagttaagcctgaggcacttccgacga
ggaaggaggagatcgggtgctgttgtagcacatactggatatggtccacatcagcaagat
ccccatgaagttcacaggaacatacctcctcatgcaaatgcactttgtcacttccatatt
gctgccagtatcaatccagccacagatattcctctactcccttctatcacatctctgagt
cttggtgaaaatgaagaaaaaagtggaccttttgttgtgcactggctaaacaacaaagaa
cttcattttactttatccatggaagtatttttgcaacaacttaaaaagagttttgaacat
cattcgcctgagactaacactgaggaatctaatcaaatggatggcagatcggaagacgac
gttgatgaaaatggagatgaacaaaaaggaaaccaagaaaagaaggaactgggtgatgag
aagactattccaaattcgagccttgttcctttatctcctaatattattgatcatgaaatt
gaagtactactttctgaatggagtaaaaatgccgacatgctattcagtatacatcctatg
gatggttcactgctggtatggcatgtggactggctagatgaataccagcctggcatgttt
cgccaggtgcaggtgtcatttgtctcaagaattcctgttgcatttccaactggtgatgca
aactctctttgcagaagtatagttatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttct
ggacacagtaaatcaaccaacagtttaaaactaagcatcttcacacccaatgttatgatg
atttccaaacatgcagatgggtcattgaaccagtggctagtgagttttgcggaggagtct
gctttttcaactgtcctcagtatttcacataaatcccgatattgtggtcaccgttttcat
cttaatgacttggcttgccactcggtattaccacttctccttacaacctcacatcacaac
gctctaatttcaccagatgctgagaatgcaaaacaggcaaatgattctttaaagtctcag
gagtcaccagtaagacttcagagtaggggcaatgaagatgtaacatcccaggatcccaat
gcggtttacagtgaacttattctttggagagttgaccctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattccctccatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctattgccttggggcatactgtaattctccaagt
gcctgctttgtggctagtgacggacagcatctgagattatatcaagctgtaatagatgct
aagaaacttttgtgtgagctctccaatccagaaatttctaaatatgttggtgaagttttt
aacatcataagtcagcagtctacagctcgcccaggatgtatcattgaactggatgctatc
acagagcttcatggcaggaaaacacagttattccatgtttttcaagaagacttcatttta
agtaaccaggagaaggaaatatctgaaaagaacaaattatcagaatctggaaaccagcag
aatggattctctgaaaaattctacttgatagtaatagagtatactcaaaaccattcatta
ctacatatgtggcatttacatttgaagtcaattcctgtctcagtagatgaaaagatagat
tcaaacacacctgaagcagcaacacaaacggaagaactgtcgtcttcaccagatccagag
aagatccagtcacctttcactcaaaagtatcaagcctgtagagcaaaccttcagagcacc
agctggcttactttgtcctccagaatggtatatagtcaagagttgagtttgccagaagga
gtagagataataagtgtaaagccatcagcaggacatctgagttcttcttccatatatcct
gtttgtcgtgcaccgtatctgctggctacttcatgctctgatggaaaagttcgattctgg
agatgcagagttactactgaatcatcagcttcctccatgccagaatgtagtgcacgtagt
gatgttacatatgtatgggaagaatggcctttactgattgaggatggacttcttagtagt
agtgctattaatgttccaggaaggccaactgaagttagctgtgctcacacaaacagatta
gcagtagcatacaagcaggtaacatctaaaaatagtaatccttctcaaaatttcgtaatg
catgtcggtatttttgaatgtgaatctacaggcggtggttcttggattctagaacagact
cttcatttagatgagataggcaccatgttaggctctggtgttagtattgatagcaattta
gtggcatataaccaacaagacatttctctgtctcatggtgggaatattatgcccagcact
aagcacttggtgcacttagattggatgtctagggaagatggttcacatattctaacagtg
ggaataggatcaaaactttatatgtttggtcaggtgtctgggaaaatgcaagaacagaat
ggtaaggagattactacagtctcccatagtggcagtatgaaggctacaacactttctagg
tttgttctgctgcgttgtgtcgacttggtttcatctgtagaggggtcacctccttttcca
gtctctttgtcttgggtgcgtgatggcattctagtagttggaatggattgtgaaatgcat
gtttattcccagtggcaatctccttccaagcaggaactagttagtacagattcgtgcagt
ggaagtatgccgtgtacagctagcttaatgaaacaaagccagtcagctgcctcaggtctg
catccgccaaagcgaaccttgaccagatctatgaccagccttgcacagaaacttagtggg
aagagatctgcctgtgatctgtctacagaaatggaagactctggtctttttgaagcagct
catacactatctcccactttacctcagtaccatccatatcaactgttggaactcatggac
cttggtaaagtacgtagagcaaaggccattctgtcccatctggtgaagtgcattgctgga
gaagttgttgctataaatgaatctgaacctaatcatgataggaggctcagatctctaacc
atcagtgctagtggaagtactgccagagatcccaaaacattcagcaaaagtgagactaca
gactatattgaaatagactctgttccaccattgcctttgtatgctctgcttgctgcggat
gacgattcatctcattcctgttcagagaaggctaataatcaaaacagtcaaaataaaaaa
gatatgccgaatgacaattacgaagatctctttcaaagtactattataagtacagatgaa
cttgttacatttgatgcagaggaagaaagttcgaaaccaaaagtcatcgatctttctcag
tatagcccaacttactttggaccagagcatgctcaagttctttctcgtcacttgcttcat
tcaagcttaccaggtctgactaggatggagcaaatgtcgttgatggccttggcagataca
attgctactaccagtactgacatcggagaaagcagagacagaaatcagggtggagaaact
cttgatgagtgtggtttaaaatttttattggctgttcgtcttcacacatttctaacaact
tcacttcctcctgtacatcgagctcaactgcttcaccaaggcttgtctactagtcatttt
gcctgggcgtttcactcagtagcggaggaagaactactgagcatgctccctgcagtgcag
aaaggagatccaacatggtcagaactcagagctatgggtataggatggtgggttcgaaat
atccatagcttgcggaaatgcatagaaaaggtggctaaagcagcctttcagcgaaacaat
gatccacttgacgcagccattttttaccttgcaatgaaaaagaaggctgtgatctgggga
ttatacaggtcccaaaaagatactaaaatgacacagtttttcggaaacaactttactgag
gacagatggcgtaaagcagcattaaagaatgctttttctttgcttggcaagcagcgtttt
gaacattctgcagcatttttcttgttggcaggacacttaaaagatgcagtggaggtctgc
cttgaaaaactgaatgacattcaattggctcttgtaatatcaagactttatgagtcagag
tttgaagtatccagtacttataaatctgtactacagaagagagttttgggaagtgtgttt
cctggaaaagagagctcaggaaacatgcactgtgacccttttctccgaagtatggcttac
tggattttggaagattatagcaaggctcttgacactttgattaaacattctgttgaaggt
gaaggagatgaaggagacggttcatcaagttgtaaccctgcagtgtttaacttctataac
tacttaagaacacatcctctattgttgagacgtcattttggctcttctgatacatcttcc
acacacatttgcctaacagtagaaaatggattagctgacaaaatcaacatgggcgaaaga
cggctgtttttcacaactgcatatgctcatctaaaagctggttgtcctatgttggcctta
gaagtgttatcaaagatgcccaaagttgtcaagaagtcaaagtctttctgtagatcccct
agtttaatggatactagtaaagatttctcaccatcttctccagttagagagttggaaaca
aaagaccgatcttccagtgttgattggtcacagccagtatttaatggtctaggttcacct
tcagactgttcatcaggaaaacattcaagttcaactctttcctttgactggagccagcca
agtgtggtattccaagatgaacaattgaaactacagtcagacagtgatgaaagtgatgag
agtgaagattcttccctggtaatgaaagagctaaaacctccaaagaaaactgaaaaatta
cctgaaacaagttctagctacacagaatcttttagtgtggttgatgacaaagatatttta
agtccatcagaagatataatttcagcacagctgaagttcagagcatgcctgaaaattctt
actgtagagcttcgtaccctgtccactggttatgaggtagatggtgggaagttgaggtat
cagctttaccagtggcttgaaagagaagtggtagctcttcaaaagacctgtgattatagt
gttgaagtagaagagagacagtcaggaataaacgtgatgccagaggaagttccgttacat
gaaaatactgaagacttagctgaacagcaaaaaaatatgctacaaaaagaagactttcag
aaaagatgtcaatggcttctgaaataccagtctctcctaagaatgttccttagttactgc
atacttcatggctctcatggtggaggtttggcatctgtcagaatggaattaattctgctg
ttgcaggagtctcagcaggagcagtcaatgcagaaaccttctagccctctaccagagcaa
agctccatacctctcctatttgcttgcacagctagtgccaaaacagtggttgctaatccg
ttgctacatcttggtaacttaactcatgatatattacatgccataataaaccttgattcg
ccacctcatccagatactcagaacaataagatatatgtaatgcataccttagcagcatca
ctctctgcttgcatctaccaatgtctctgtgatggccacagctacagctcatttcaagca
aatcagttcactggaacagtgtatcagacagtgctattaactcagcgccattctctaaga
acaacaggcttagaagaaacagcgactcccaatacatcacctgctcagtggccaggaata
acgtctctaatatgtctcttgaattctgctggtgaggaagcccagccaggtctcacagtt
ttactttgtgaaatcctaactgcggtctatctgagtctcttcatccatggcctagcaaca
cattctagcgatgagttgtatagaattatggctcatccacttaacaacaaaatgtggtct
gctatctttggaggaggagctcatacacccagcagaggacaactgcaattaaagacaaaa
actgatgatggagagaaacagcaaaaacgttacaagctttcatcaaaaatctctccaaaa
gagagttctcattcacctgcattgccattggtagaccaagaatctccatcctacaaagaa
agatttattcctcccgagcttagcatctgggattatttcattgcaaagccttttcttcca
tcacaaagtgcagtggaatatgattcagaagagagtcaggaaagtggtgaagatgaagaa
ggtattggtggagatgggtttgcatcaaattcacataatcaagagcactctaattcaaat
tcatatagttggtcactgatgaggttggcaatggttcagctggtacttcacaatttgaag
actttctaccctttggctggacatgatctttcagagcttccagttagctctccaatatgc
catgcagttttgaaaacactacagcgctgggaacaagttcttcttcgacgtcttgagcta
tatgggggtccccctcaacattatatttcagttcatgcttctgaagatgccctagctgcc
ggtcctgcattgcttcgtcataaaactttacttgagcctacaaacactccattccgatct
aacagtcatgttgcactatctgtgaaaaggctctggcagtacttggttaaacaggaagaa
gtccaggaaacctttatcagaaatatttttacaaagaagcgatgcataaatgagtcatta
gaggagcacaatgaaaccatgaaaaattctgttgtggtggagcccatcgtcaataagata
gaaacagatttgggatacccaggaggcaaggcaagaataatccataaagagtctgacatc
attactgcttttgcagtcaataaggcaaatcggaactgcattgcaatagcatcgagtcat
gacattcaagaattagatgtttcttcaattttagctacacaaatctatacctgggttgat
gacgatgtggaagtagaacataaaggggctgatgatttcttagttatacatgctcgtgat
gatctggtaaatgttcagggaaccactccttacactcatagtaatcctggcacacctatc
aatatgccttggctcggtagtacacaaactggcaggggtgcatctgtgatgctcaagaag
gctattaataatgtcagaagaatggcctctcatccaacgttaccatattacctgacaggt
gctcaagatggtagtgtaagaatgtttgaatggggtcatgcacagcagatcacatgtttt
cggtctggtggcaactccagggtaactcgaatgagattcaactaccaaggaaataagttt
gggattgttgatgctgatggatacataagtttatatcaaacaaattggaaatgttgccca
cttactggaacttcacctaaaccatatttgacctggcagtgtcataacaaaacagccaat
gactttgttttcatcagctcatcatctttgatagccacagcaggactgtcttctgacaac
aggaatatttgtctttgggatactttggtttcacctacaaatagcttggtgcatgctttt
atctgccacgatagcggagccacagtgctagcgtatgctccaaaacatcagctgttattg
tctggaggcagaaaaggctttacgtgtataattgatcttcgccaaaaacagcagcaacag
ttactccagagtcatgattctccagtcaaagcaattgctgttgatcctacagaagagtat
tttgtcacgggatctgctgaaggcaacataaaggtatggagtctgtctacatttaatctt
cttcacactttcatcaatgagcatgctcgacagtctatcttcagaaacattgggacggga
gtcatgcaaattgagacaggaccagcaaatcacatattctcctgtggtgctgatggaaca
gtaaagatgagaatattggctgatagattcagccctttaaatgacatgttaaaaaatgat
gtgaaacttatgatctaa
DBGET
integrated database retrieval system
