Phalacrocorax aristotelis (European shag): 142050611
Help
Entry
142050611 CDS
T11493
Symbol
SMARCA2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142050611 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142050611 (SMARCA2)
03036 Chromosome and associated proteins [BR:
parx03036
]
142050611 (SMARCA2)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142050611 (SMARCA2)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
142050611 (SMARCA2)
Chromatin remodeling factors
BAF complex
142050611 (SMARCA2)
PBAF complex
142050611 (SMARCA2)
GBAF(ncBAF) complex
142050611 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
142050611
NCBI-ProteinID:
XP_074935556
LinkDB
All DBs
Position
Z:complement(52520907..52635844)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGTMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVQHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVPSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPTRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHTMSGAAAGP
GPAPGMPGHTAAITPKTWTEGQAPDMSVSNAQQKLPAPPPSGRPSPAPPAAQPAAAVPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKIHLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDE
EEEEESESESKSVKVKIKLSKKDEKSREKGKGKKRQSRTKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagatcctggcaccatgcctcatcctggtccttctcctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccaggtccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccgcccagtgtccagcatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcaccaaatgcataagtctattgatggcttg
cacgaaaaaggaatggttgaagacgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccgtctccactaggagcaccggagcatgtgcctagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacccattataccaggagatccacaa
gttatgaatcaacctaccagaggtccttcccctttcagccctgtacagctgcatcagctc
cgggctcagattctagcatacaaaatgctagctagaggtcagcctttaccagaaaacctc
cagcttgctgttcagggcaaaaggaccctgcctggcattcagcaacagcagcctcccagt
gccttcaacagacagtctggtattggattacatacaatgagtggtgctgcagctggacca
gggcctgctccagggatgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaatgcacagcaaaagcttcctgcgccaccccct
agtgggaggccttctcctgccccccctgctgcccagcctgctgctgctgtgcctgggcct
tctgtaccacagccaccaccgggacagccttcacccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccacctgatttgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaacttccagcgccagctaagacaagaggtagtagcttgtatgcgtcgtgacacaaca
ttggagacagcattgaactccaaagcctacaaacgaagcaagcgccagactttgagggag
gcccgaatgactgaaaagcttgagaaacagcagaagatagaacaagaaaggaagcgcagg
cagaagcatcaggaatatctgaatagcatattgcagcatgctaaagatttcaaagagtac
caccggtcagttgctgggaaaattcagaaactttctaaagctgtagcaacttggcatgct
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagacgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctacctgttgcagcagacagatgaatatgtggctaacttgactaacctggtatgg
gagcataaacaagcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaacgcagaagggatggcatccggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcaccaaaagcaagtcagctggatgcttggctggaaatgaacccc
ggctatgaagttgctcccaggtcggacagtgaagacgaaagtggctctgaatatgaggag
gaggatgatgaagaagaatcaagcaggttagaagcagatgagaagatacacctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaataattgagacagccaaacaagat
gtggatgatgagtatagcatgcagtatagtgctagagggtctcagtcctattacactgtt
gctcatgcaatcacagaaagggtggaaaagcaatcttctcttcttattaatggcacacta
aaacattatcagctccagggactggaatggatggtttcactctataataacaatctgaat
ggaattttagctgatgaaatgggactaggaaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagacttaatggtccctatctcatcattgttcccctttcgact
ttatccaattggacatatgaattcgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaacactcactatgtggcccctaggcgaatactgctgactgggactccattg
cagaacaaactgcctgaactttgggctcttctcaatttcctcctcccaaccattttcaag
agctgtagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagagactattctgatcatccgtcgtctccataaagtgctccgaccc
ttcttgctgaggagattgaagaaagaggttgagtctcaactcccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttcttacagatggttctgaaaaagacaagaagggaaaaggcggtgcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcctttgctgaacatttaggctactcaaatggtgtcatcaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtatcctaccaaagttaagagct
actaaccaccgcgtgcttcttttctgtcaaatgacatcactcatgacaataatggaagac
tactttgcctttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacccgggtcacaatactttatcttcttgctg
agtacaagggctggaggactaggcttaaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcaccaggacttgcaggcccaagatagagctcaccgaattggt
cagcaaaatgaagttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtacaaactgaatgtagatcagaaagttattcaggctggaatgttt
gatcagaaatcctcaagccacgaaaggagggccttcctacaggctatattggaacatgaa
gaagagaatgaggaagaagatgaagtacctgatgatgagactctgaatcagatgattgcg
cgacgtgaggaagaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccccaaacgtaagccgcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcaacgtagggatgtggactacagtgatgctctcacagagaaacaa
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggacagctcaggacggcag
ctaagtgaagtcttcattcagctcccgtctaggaaagaattaccagagtattatgaattg
attagaaaaccagtggacttcaagaagataaaggaaagaattcgcaaccataagtatcgg
agtcttggagacttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaat
ctggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagcgcg
cgacagaagattgccaaagaggaagaaagcgaggatgaaagcaatgatgatgaagatgaa
gaagaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagcttagt
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagagacaaagccggacaaaa
gccaaacctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
