Phalacrocorax aristotelis (European shag): 142050637
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Entry
142050637 CDS
T11493
Symbol
ITGA1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04518
Integrin signaling
parx04810
Regulation of actin cytoskeleton
parx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142050637 (ITGA1)
04518 Integrin signaling
142050637 (ITGA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142050637 (ITGA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142050637 (ITGA1)
04810 Regulation of actin cytoskeleton
142050637 (ITGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142050637 (ITGA1)
04515 Cell adhesion molecules [BR:
parx04515
]
142050637 (ITGA1)
04090 CD molecules [BR:
parx04090
]
142050637 (ITGA1)
Exosome [BR:
parx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142050637 (ITGA1)
Cell adhesion molecules [BR:
parx04515
]
Integrins
Integrin alpha subunits
142050637 (ITGA1)
CD molecules [BR:
parx04090
]
Proteins
142050637 (ITGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
EIF3I
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
142050637
NCBI-ProteinID:
XP_074935634
LinkDB
All DBs
Position
Z:complement(63753713..63823324)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAASYWMLAALFHLVSSSNVDVKNAMTFSGPLEDMFGYTVQQYENEEGKWILIGSPLVGQ
PEKRTGDVYRCPVGRDNQSPCIKLNLPAATSVPNVVEVKENMTLGTTLVTNPKGGFLACG
PLYAYKCGRLHYTTGVCSNVSSTFETIEAIAPSVQECKTQLDIVIVLDGSNSIYPWDSVT
AFLNSLLNNMDIGPQQTQVGIVQYGQTVVHEFFLNTYTTTEDVMAAARRIQQRGGTQTMT
ALGIDTARKEAFTEAHGARRGVQKVMVIVTDGESHDNYRLKEVIDNCEDENIQRFAIAIL
GSYSRGNLSTEKFVEEIKSIASKPTEKHFFNVSDELALVTIVEALGERIFALEATTDQQA
ASFEMEMSQAGFSAHYSQDWIMLGAVGAYDWNGTVLMVKDSGISMPTNDTFRDRLSEKNE
PLAAYLGYTVNSALTPGGVLYIAGQPRYNHTGQVIIYKMEGREVQVLQRLNGEQIGSYFG
GVITTVDIDRDSFTDLLLVGAPTYMGTEKEEQGKVYVYGLNKTKFEYQMSLEPIKQTCCS
PLKQDTCKVLKNEPCGARFGTAIAAVKDLNLDGYNDIVIGSPLEDDHRGAVYIYHGHGNT
ISKKYSQRIASGGDGEKVKFFGQSVHGEMDLNDDGLIDVTIGGLGGAALFWSRDVAEVNV
SMQFTPKSINIQQQNCQINKRKTICINATICFKTRLKSKEDAFESSLQYWITLDSQRQIS
RSLFTESHERKMQKNITVKGSECIKHNFYMLDKPDFQDSVKVLLEFNFSDPESGPVLDSS
LPNSVSEYIPFTKDCGAKNKCISDLVLNVKASIAGDSSSPFIVKSRNDKFTIQLSVKNKK
DSAYNTRVLVQYSPNIIFAGIEDIQKDSCESNHNITCKVGYPFLKPAEEIFFKISFQFNA
SYLLENATVHVYATSDSEEPPETLNDNRGHISIPVKYEVGLIFISVFKEHHVIIAANDTI
PSAINTTEQIGDEVTLHYRIEKGEHFPMPDLTLQILFPNITAAKNTLLYLTALSHSQNAI
CQTSYPVDPLKISTGKPFVLPEIKEPTKDTIMDCDTYSCASIDCALVPSDIYIVNISLRV
WKPTIIKASIHSLTLVVKALLRSENSSLILRNDYQKLETMIKISKELAPGTVPLWVILLS
IFAGLLILALLIFALWKAGFFKRPLKKKMEK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctactggatgctggcagctctctttcacctcgtcagctcttctaatgtt
gatgtgaaaaatgcaatgaccttcagtgggcctctggaagacatgtttgggtacacagtc
caacagtatgaaaatgaggaagggaaatggatacttattggttcgcctttagttggccaa
cctgagaaaagaacaggagatgtatacagatgccctgtaggaagggacaaccaatcaccc
tgcataaaactgaacttaccagctgctacttctgttcctaatgtcgtggaagtaaaagaa
aacatgactcttggaacaaccttagtgactaatccaaaaggaggctttctggcatgtgga
ccactttatgcttataagtgtgggcgtttgcattacacaactggagtttgttctaacgtc
agctctacttttgaaaccatcgaggcgattgctccgtctgtgcaagagtgtaaaacccag
ttggacatcgtcatagtccttgatggatccaacagcatttatccatgggatagtgtcaca
gccttcctaaacagcctcctgaataacatggatataggtcctcagcaaacacaggttgga
attgttcagtatggacagactgtagtccatgaatttttcctgaatacatacacaacaaca
gaagatgtgatggctgcagccagaagaatacaacagcggggtggcacgcaaactatgaca
gccctgggaatagatacggcaaggaaagaggcttttactgaggctcatggcgcacgaaga
ggagttcaaaaagtaatggttattgtgactgatggggaatcacatgataactacagatta
aaagaagtgattgataattgtgaagatgaaaacattcagagatttgctattgctattctt
ggtagctacagtagaggaaatttaagtactgagaaatttgtagaggaaataaaatcaatt
gccagtaagcctactgaaaagcatttcttcaatgtctcagatgaattagctcttgtaacc
attgttgaagcacttggagagagaatatttgccctggaagcaacaacagaccagcaggca
gcttcattcgaaatggaaatgtctcaagctggtttcagtgctcattattctcaggattgg
atcatgcttggagcagttggagcgtatgactggaatggcacagtgctcatggtgaaggat
agtggtatttcaatgccaactaatgacacttttcgcgacaggttgtcagaaaaaaatgaa
ccccttgcagcctatctaggatatactgtgaattcagcattgacacctggaggtgtactg
tacatagcaggacagccacgatacaatcacactggccaagttatcatttataaaatggaa
ggaagagaggtacaagtacttcagaggttaaatggggaacaaattgggtcatactttgga
ggtgttattaccacagttgacattgacagggactcatttacagaccttcttcttgttgga
gcacctacgtatatggggactgagaaagaggaacaagggaaagtatatgtttatggtctg
aacaagacaaagtttgaatatcagatgagtctcgaacctataaagcaaacatgctgttcg
ccattaaaacaggacacctgtaaagttcttaagaatgagccttgtggtgcacgattcggg
accgcaattgctgcagtgaaggatctcaaccttgatggatataatgacattgtaataggt
tctcccttagaggatgatcatcggggagctgtttatatttatcacggccatggcaacaca
atcagtaaaaaatattcacagcgtattgcatcaggtggagatggggaaaaagtaaaattt
ttcggccagtctgtgcacggagaaatggatttaaacgatgacgggctgattgatgtcacc
attggaggccttggtggggctgccctcttctggtctcgtgatgtggctgaagtaaatgtt
tccatgcaatttacacccaaaagcatcaatatccaacaacaaaattgtcagataaataaa
agaaaaacaatatgcataaatgccacaatttgttttaagaccagactaaagtcaaaggaa
gatgcatttgaatccagcctgcagtattggattactcttgactcacaaagacaaatatct
cgaagcttgttcacagaaagccatgagaggaaaatgcaaaaaaatataactgtcaaaggg
tcagaatgtattaaacataacttctacatgttggataagcctgactttcaggactctgtg
aaggttttgctggagttcaatttttctgacccagagagtggacccgttcttgatagcagc
ttgcctaattcagtgtctgaatatattcctttcacaaaagattgtggagcgaaaaataaa
tgcatttcagatcttgttctgaatgtaaaagcaagcatagctggagacagctcttctcca
ttcattgtaaagtcacgcaatgataaattcaccattcagctctctgtgaagaacaaaaaa
gacagtgcctataataccagggttttggttcagtattctccaaatattatttttgctggc
attgaggatatacagaaagatagctgtgaatctaatcacaacatcacctgtaaagtagga
tatccatttctaaaacctgcagaagagatatttttcaaaatatcattccaattcaacgca
tcatatctcctggaaaatgctactgttcatgtatatgcaacaagtgacagcgaagaacca
cctgagaccttaaatgacaacagaggacacatttcaattccagtaaaatatgaagtagga
ttaatatttataagtgttttcaaagagcaccatgttataatagcagcaaatgataccatt
ccttctgccattaacacaacagagcagattggggatgaagttactctgcattataggatt
gaaaaaggtgaacactttccaatgccagacctcacactgcagatcttatttcccaatatt
acagcagccaagaacactcttctctaccttactgcattgtcacattcccaaaatgccatc
tgccaaactagctaccctgtagatcctttaaagatcagcactgggaaaccatttgtgttg
ccagaaataaaagaacctacaaaggatacaattatggattgtgatacatacagctgtgca
tccattgactgtgccctggtcccatctgacatatatatagtgaacatttcattaagagta
tggaaacctaccatcataaaagcaagtattcacagcttaacccttgttgtgaaagcatta
cttaggagtgagaattcatcactgattttgagaaatgactatcaaaaactggagaccatg
attaagatttccaaagaactcgcaccgggtacagtccctttatgggttatcctcctgagt
atctttgccggactcttgattcttgcactgcttatatttgctttgtggaaggctggattt
ttcaagagaccactaaagaagaaaatggagaaatga
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