Phalacrocorax aristotelis (European shag): 142052101
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Entry
142052101 CDS
T11493
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142052101 (SOX1)
Transcription factors [BR:
parx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142052101 (SOX1)
SSDB
Ortholog
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Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
142052101
NCBI-ProteinID:
XP_074938032
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All DBs
Position
1:66477751..66479451
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AA seq
376 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGGNKANQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGG
YAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGSGGHPHHPHPHHPHHPHNPQPM
HRYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAAASSGALG
ALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHY
QSASTGVNGTVPLTHI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggtggcggcggcggcggcggcggcggc
ggggggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtgg
tcgcggggccagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatc
agcaagcgcctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatc
gacgaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccgg
ccccggcggaagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctg
ctgagcgccggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggc
gtcagccccggcggcgtcgggcagcggctggagagccccggcggcacggccagcggcggc
tacgcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcg
gcggcggcggcgatgatgcaggaggcgcagctcgcctacggccagcacccgggcagcggg
gggcacccgcaccacccgcacccccaccacccgcaccacccgcacaacccgcagcccatg
caccgctacgacatgggcgccctgcagtacagccccatctccaactcgcagggctacatg
agcgcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaactcg
gcggcggcagcggcggcggcggcggcggcggcggcggccgcctcctcgggggcgctgggc
gccctgggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcg
cgggccccctgccccggggacctgcgggagatgatcagcatgtacttaccggccggggaa
ggcggggatccggcggccgccgccgcccagagccggctccactccctgccccagcactac
cagagcgccagcacgggggtgaacggcaccgtccccttgacgcacatctga
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