Phalacrocorax aristotelis (European shag): 142052623
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Entry
142052623 CDS
T11493
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
parx04990
]
142052623 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
parx04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
142052623 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
142052623
NCBI-ProteinID:
XP_074939070
LinkDB
All DBs
Position
2:complement(33569312..33640338)
Genome browser
AA seq
968 aa
AA seq
DB search
MLAETSLSIWGWGSLGVVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
GSINLSLDDLSNVPSDETVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEETWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKSSPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPQRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHTQLNKRMVYVFLERFLETLFPQNKFHELFNKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagaccagtctttccatatggggatggggaagtcttggcgttgtgcttttt
ctagtgacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaactcagaaaaataccttgag
cagtgtgaacattcgtttcttccttgtacatcagttgggatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaatataatt
gatgagcctttgcagcaggtaatccagttttctctgagagactatgtgcagtattggtat
tacacactaagtgatgacgaatcgtttcttctggaaatcaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttacttcactacacga
cttgttgatgactttggcactcatcttcgagtcttcagaaaagctcagcaaagaatagca
gagaaaggtgatcagatgaaagaccaagctgaagaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagagttggaagcagtgaaagataaagcaagtgaagaactgcaatatcttcgatctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagagattgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacaattttttatggattacatgcagcagactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcagcagctggaggtactt
caaagcaggcagaaagatggaaagcatcaaactaatcaaaccaagggtctattaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccgagagttaatatt
gatgacaacttagtagcaaaactggcagaaacactgaaccatgaggatccaacacctgaa
atctttgatgatattcagagaaaggtatacgaattgatgctgcgcgatgaaagattctac
ccttcattcaaacagaatgtgttgtatgtgcgtatgttagctgagctggatatgctgaag
gatcctagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
ggcagcataaatctgtccttagatgacctttcaaatgtcccttctgatgagacagttcaa
ctccatgcatacatctcagataccgtctatgctgactatgacccatatgctgtggcagga
gtgtgtaatgaccacggcaagacatacgcactgtatgctatcacagtccatcggcgaaat
gcaaacagcgaagagacatggaagacatatcgacgctacagtgacttccatgactttcac
atgaggatcactgagcaatttgaaaaccttgcaaatatactgaaacttcctggcaaaaag
acatttaacaacatggacagagaatttttggaaaagaggaagaaagatttaaatgcatat
ttgcagctcttgttaaatcctgaaatgatgaagtcttctccggctttagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggggattttgcacggaagatg
gacacatttgtaaatcccctgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
ctccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagactgggacaagacataaagcaatcatttttcaaggtgcctcctttgatccagaaa
acctattcggatcctgaccattgccgtgttgcagcaccaattgatgacaatgtggatgac
aatattccactgagagtaatgctccttcttatggatgaagtctttgatttaaaggaaaga
aatcagtggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggtgacacgattaacagaaaaatagttgatcatgttgattggatgacgtctcctgagcaa
gtagcagatgcagtgaaacgcttcagagatgctttttggcccaacggcattttagcagag
actgttccacagagggacaaagctattagaatgagaacaagagtggcagggaagaccaaa
ttactggaggtaatgccagatgaactgaagcacatcataggtgctgagacaacacggaaa
ggcattctacgggtctttgaaatgttccagcacactcaactgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccgcaaaataagttccatgagctcttc
aacaaactgcattcacgatcaaagcagatgcagaggtataagcagagactacactctact
caagcgccttccttgcagaaaaggtga
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