Phalacrocorax aristotelis (European shag): 142052767
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Entry
142052767 CDS
T11493
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04621
NOD-like receptor signaling pathway
parx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
142052767 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142052767 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
parx04054
]
142052767 (NOD1)
Pattern recognition receptors [BR:
parx04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
142052767 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
WHD_NOD2
LRR_4
AAA_16
AAA_22
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
142052767
NCBI-ProteinID:
XP_074939449
LinkDB
All DBs
Position
2:46952515..46983217
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AA seq
951 aa
AA seq
DB search
MEGQLCANLEISVKKPAGASPPSFIALLKVYRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFICVLQKVTDAYYELQPWLDEIGYKPSENI
CSKPVVNTDPVSRYRQKLRHELGRDSKFVMSYAQREEMLLEEIYSNSIMELVSFTNESLG
KVSQLEALFDDAVGLINEDGETIYVFGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEMCSPNEPIHPLVLLISLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSSN
NLKEYAAIFFKDEGQRTLVLNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMFDSHELPD
CSVTLTDVFLLMIEVHLNRSLKTSLLRNNTRSQAEMFKSRKETLLALGKMAYKGMENSFF
VFEQEEVSSANISEEDLQLGFLRTVKGYSGCDDQSTYEFLHLTLQSFFTALFLVIEEKVG
AKELLQFFNECSSTETAQPTCLRIPWLKKQLAAEDPFRNNEHFHFTNLFLCGLLSRSKQK
LFRHLVLPAVIKRKRKTLITYLGESMKSHLKGLSRSRLAKYNQIQVQPNFVWMLRCLYET
QSEKVGKLAAKCMRANYIKLTYCNAYSADCSAISFVVNHFQKHLALDLDNNNINDYGVKQ
LLPCFSKLAVIRLSVNQITDHGVRILYEELSKYQIVTFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLALNGITTEGGKSIAEAMQHNNSVKIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgcgctaacttggagatttctgtgaaaaaacctgcaggagcaagt
cctccctccttcattgctttgttgaaggtataccgagaacttctggtcagtagaatccga
aacacacagtgtttgattgacaacttgattaagaacgactacttctccactgaagacgca
gagattgttgtccaatttccaacacaagcagataaggttcgcaaaattctagacctggtt
cagagcaagggagaagaagtctcagagtatttcatctgtgtcctgcagaaagtcactgat
gcttactatgaacttcagccttggctggatgaaataggttacaagccttcagagaatatt
tgtagtaaacctgtggtaaatacagatccagttagcaggtatcgccagaaactcagacat
gaattgggacgggactctaagtttgttatgtcatatgctcagagggaagagatgctgctt
gaagaaatctactctaacagtattatggagctggtcagttttactaatgagagtctaggc
aaagtgtctcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactatttatgtctttggcgatgcgggaattggaaaatccatcctgctgcaaaagata
caaagcctttgggccagaaaagaattggacataggggccaaatttttcttccgttttaga
tgcaggatgtttagttgctttaaggaagatgaagccatatgtttgaaagacctactcttc
aaatataattgctacccagaccaggaccccaccgaagtgttccatcacatactgcaattc
cctcatacagttcttttcacatttgatggctttgatgaaatctattccaactttgatctc
agtagtgttcctgagatgtgttcacccaatgaacccatccaccccctagtgctgctgata
agccttctcagaggaaagctgcttaagggatccaagaaaattcttacggcgaggacagga
actgagatccaaagaaacatcattagaaagaaagtgttgctccgtggtttctccagcaat
aacctgaaggaatacgctgccatttttttcaaagatgaggggcagcgaacactggtattg
aaccaattggaagctaaccccaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctatgaacacttccattccatgtttgacagccacgagcttccagac
tgttctgttacattgacagatgtgtttttgctcatgattgaagtccatctgaaccgatct
ctgaaaacaagtttgctgaggaacaacaccagaagccaagcagagatgttcaaatcaaga
aaggaaactcttctagctttgggtaaaatggcatacaaagggatggagaactctttcttt
gtcttcgagcaggaggaggtctcatcagcaaacatctctgaagaagatttgcagttgggc
tttctcaggacagttaaaggttacagtggctgtgacgatcagtccacttatgagttcttg
cacttaactcttcagtcttttttcacagctttgttcctggttattgaagagaaagtgggt
gccaaggagttacttcagtttttcaatgaatgttcttccactgagactgcccagcctact
tgcctccgtattccttggttgaagaaacagctagcagcggaggatcctttccgaaataat
gaacactttcattttaccaacctgtttctttgtggcctgctttctagatccaagcagaag
ctcttcagacatttagttttgcctgcagtcattaaaaggaagagaaagaccctcatcaca
taccttggggagagcatgaaatctcacctgaaaggcctctctcggtccaggcttgcaaag
tacaatcagatccaggtccagcccaactttgtttggatgctcaggtgcctttacgagacc
cagagcgagaaagtggggaagttggctgccaaatgcatgcgtgccaattacatcaagctc
acatactgcaatgcctactctgctgactgcagtgctatttcctttgttgtgaatcacttt
caaaagcacctggctctggatttggacaacaacaacatcaatgactatggagtcaaacag
ttgctaccgtgtttcagcaagcttgcagtgatcaggctcagtgtaaatcagatcacagat
catggagtaaggatcttgtacgaagaactctccaagtaccaaattgtgactttcttgggc
ttatacaacaatcaaatcacagatgttggagccaagtatgttgcaaaactaattgaagag
tgctcaagccttgaatacgttaaaataggagcaaacaaaataacgagtgaaggagggaag
tgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagacgaaggagcaaaggcatttgcagaggccctgaggaaccaccccaggtta
acaaacgtgagtctggcactcaatggcatcacgacagagggaggcaaaagtattgctgaa
gctatgcaacacaacaactccgtgaaaatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtgaagtacctcagcgaagctctcaaggag
aacacagctattaaagaagtctgtttgaacgggaacctgataagccaagaggaggccaaa
gcttttgaaaatgaagaacgaatcatttgcttctga
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